RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RTN4RQ9BZR6 473 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 ZNF586Q9NXT0 402 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 S4R3C0 116 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 GPR179Q6PRD1 2367 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 GREB1Q4ZG55 1949 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 PSG9Q00887 426 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 Q1RN00 199 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 OSR1Q8TAX0 266 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-205ENST00000368213 GPHA2Q96T91 129 aa9.07□□□□□ -0.96
PTPRK-205ENST00000368213 ICMTO60725 284 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 HTN3P15516 51 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 PLA2G5P39877 138 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 TMEM255AQ5JRV8 349 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 MRPL20Q9BYC9 149 aaKnown RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 TMEM133Q9H2Q1 129 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 TRAV20A0A0B4J274 112 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 GPX1P07203 203 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 LRP11Q86VZ4 500 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 SLC25A15Q9Y619 301 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 CCDC88CQ9P219 2028 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 SRSF10O75494 262 aaKnown RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 DLX6P56179 175 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 ZNF146Q15072 292 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 FDX2Q6P4F2 183 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 TCF19Q9Y242 345 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 SRCAPQ6ZRS2 3230 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 ADAM11O75078 769 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 IL4P05112 153 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 GPR183P32249 361 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 OR4A47Q6IF82 309 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 Q71RC1 249 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-205ENST00000368213 ANKRD36A6QL64 1941 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 IGHV3-66A0A0C4DH42 116 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 A6NNC1 897 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 C1QL1O75973 258 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
PTPRK-205ENST00000368213 NBR2O15453 112 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 IGHV3-48P01763 117 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 CD24P25063 80 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 SIAH2O43255 324 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 TGOLN2O43493 480 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 MEOX2P50222 304 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 NCMAPQ5T1S8 102 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 WBP1Q96G27 269 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 PRB1P04280 392 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 TMEM116Q8NCL8 245 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 OR5AU1Q8NGC0 362 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 FAM210BQ96KR6 192 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 PIKFYVEQ9Y2I7 2098 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 MFNGO00587 321 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 PAGE4O60829 102 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 TCL1AP56279 114 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 LINC00114Q6XXX2 140 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 VMO1Q7Z5L0 202 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 LDLRAD3Q86YD5 345 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 LRRC75AQ8NAA5 344 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 MIXL1Q9H2W2 232 aa9.05□□□□□ -0.96
PTPRK-205ENST00000368213 A0A0B4J293 547 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 HKR1P10072 659 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 CD69Q07108 199 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 ZNF525Q8N782 197 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 GPR146Q96CH1 333 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 RNF224P0DH78 156 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 CD33P20138 364 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 FOXG1P55316 489 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 SUMO1P63165 101 aaKnown RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 ASPHD2Q6ICH7 369 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 IGFL3Q6UXB1 125 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 LY6G6EA0A0G2JKS1 128 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 EMP1P54849 157 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 MRPL13Q9BYD1 178 aaKnown RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 C21orf62Q9NYP8 219 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 U3KQA8 63 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 TMEM189A5PLL7 270 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 AP4M1O00189 453 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 MPDU1O75352 247 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 SCO1O75880 301 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 PTBP3O95758 552 aaKnown RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 MYOD1P15172 320 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 MBNL2Q5VZF2 373 aaKnown RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 IL36RNQ9UBH0 155 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-205ENST00000368213 NPIPB3Q92617 1050 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 SRD5A3Q9H8P0 318 aa9.04□□□□□ -0.96
PTPRK-205ENST00000368213 TICRRQ7Z2Z1 1910 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms