RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 GAGE1Q13065 139 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 FADS6Q8N9I5 356 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-204ENST00000368210 CLN8Q9UBY8 286 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 TNFSF13O75888 250 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 LIPFP07098 398 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 ORM2P19652 201 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 TNFRSF14Q92956 283 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 LINC00470Q9BZP3 86 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 THYN1Q9P016 225 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 MPV17P39210 176 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 UBE2L3P68036 154 aaKnown RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 C1QL2Q7Z5L3 287 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 LPAR2Q9HBW0 351 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 PPIAL4EA0A075B759 164 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 PPIAL4DF5H284 164 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SMPD2O60906 423 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 PPIAL4FP0DN26 164 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 NMUP48645 174 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 RUNX1Q01196 453 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 RSPO4Q2I0M5 234 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ASCL5Q7RTU5 278 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 OR8I2Q8N0Y5 310 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF441Q8N8Z8 693 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 OR8B2Q96RD0 313 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 TECRQ9NZ01 308 aaKnown RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 PPIAL4AQ9Y536 164 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 FREM3P0C091 2139 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 UMODP07911 640 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 CELA3AP09093 270 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 GCSHP23434 173 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 KCNMB1Q16558 191 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 KLF14Q8TD94 323 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ROS1P08922 2347 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 FAM157AC9JC47 383 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 CFHR1Q03591 330 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ATOH7Q8N100 152 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 ST6GALNAC3Q8NDV1 305 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SFRP2Q96HF1 295 aa11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-204ENST00000368210 SMIM13P0DJ93 91 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 INSIG2Q9Y5U4 225 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 ZNF785A8K8V0 405 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 A8MWP6 167 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 CDX4O14627 284 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 S1PR2O95136 353 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 CLEC2AQ6UVW9 174 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 TMEM45BQ96B21 275 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 CCL13Q99616 98 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 RNF222A6NCQ9 220 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 ARF6P62330 175 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 ABHD14AQ9BUJ0 271 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 MRPL13Q9BYD1 178 aaKnown RBP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 J3QRE1 110 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 KBTBD11O94819 623 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 CA1P00915 261 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 SELLP14151 372 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 OR4P4Q8NGL7 312 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 TMEM170AQ8WVE7 144 aa11.33□□□□□ -0.6
PTPRK-204ENST00000368210 AURKAIP1Q9NWT8 199 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-204ENST00000368210 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 J3QR06 171 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 CCL21O00585 134 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 EREGO14944 169 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 GAS1P54826 345 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 A0A1B0GTI1 187 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 KIR3DP1A8MWS1 328 aa11.32□□□□□ -0.6
PTPRK-204ENST00000368210 AMBPP02760 352 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms