RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HPCAP84074 193 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 GNA13Q14344 377 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 FAM19A2Q8N3H0 131 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 MS4A6EQ96DS6 147 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 MROQ9BYG7 248 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 PARVAQ9NVD7 372 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 NAT8Q9UHE5 227 aa0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
RNU4-28P-201ENST00000364739 TRAPPC2LH3BP13 241 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 GOLGA8RI6L899 631 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 SCN2BO60939 215 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 HLA-DQB2P05538 268 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 TFPTP0C1Z6 253 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 CXCL2P19875 107 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 RBM48Q5RL73 367 aaKnown RBP0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 SPATA24Q86W54 205 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 GPHB5Q86YW7 130 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 TMEM86AQ8N2M4 240 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 PPCDCQ96CD2 204 aa0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 PCYT1BQ9Y5K3 369 aaPredicted RBP0.39□□□□□ -2.35
RNU4-28P-201ENST00000364739 STRCQ7RTU9 1775 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 GOLGA8QA0A0J9YX86 632 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 DAPL1A0PJW8 107 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 MEIS3P1A6NDR6 274 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 IBA57-AS1B1ANH7 110 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 C9JCJ5 164 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 CXCL3P19876 107 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 REG1BP48304 166 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 KCNJ3P48549 501 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 SNAP25P60880 206 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 AP1S1P61966 158 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 C4orf26Q17RF5 130 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 C10orf55Q5SWW7 151 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 RASSF6Q6ZTQ3 369 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 RAB2BQ8WUD1 216 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 SIKE1Q9BRV8 207 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 TMEM109Q9BVC6 243 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 METTL9Q9H1A3 318 aa0.38□□□□□ -2.35
RNU4-28P-201ENST00000364739 KIF24Q5T7B8 1368 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 TMED7-TICAM2A0A0A6YYA0 188 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 TMEM269A0A1B0GVZ9 245 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 OR51F1A6NGY5 319 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 AZIN1O14977 448 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 PLPPR5Q32ZL2 321 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 FAM27BQ5VT28 67 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 UMODL1-AS1Q8N2C9 162 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 ATP6V1C2Q8NEY4 427 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 TESCQ96BS2 214 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 AGPAT3Q9NRZ7 376 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 ZNHIT6Q9NWK9 470 aaKnown RBP0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 MAP3K19Q56UN5 1328 aa0.37□□□□□ -2.35
RNU4-28P-201ENST00000364739 MT-CO2P00403 227 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 LINC00614P0C842 121 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 RD3LP0DJH9 198 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 SYCP1Q15431 976 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 ZNHIT3Q15649 155 aaPredicted RBP0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 ACSM3Q53FZ2 586 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 C9orf64Q5T6V5 341 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 RIBC1Q8N443 379 aaPredicted RBP0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 SPERTQ8NA61 448 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 OR10D3Q8NH80 312 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 STOML3Q8TAV4 291 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 CHST6Q9GZX3 395 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 ANAPC1Q9H1A4 1944 aa0.36□□□□□ -2.35
RNU4-28P-201ENST00000364739 TMEM212A6NML5 194 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 APOA1P02647 267 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 UBBP0CG47 229 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 MIPP30301 263 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 EVX1P49640 407 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 HIST1H4AP62805 103 aaKnown RBP0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 FABP5Q01469 135 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 FBXO48Q5FWF7 155 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 DCXRQ7Z4W1 244 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 SLC22A24Q8N4F4 322 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 ZNF565Q8N9K5 539 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 ZNF439Q8NDP4 499 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 OR52E4Q8NGH9 312 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 NSRP1Q9H0G5 558 aaKnown RBP0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 SNURFQ9Y675 71 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 GMEB1Q9Y692 573 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 NUP160Q12769 1436 aa0.35□□□□□ -2.35
RNU4-28P-201ENST00000364739 EML6Q6ZMW3 1958 aa0.34□□□□□ -2.35
RNU4-28P-201ENST00000364739 LOC100506127A0A0U1RQW1 187 aa0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 RNASE3P12724 160 aaKnown RBP0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 CCL5P13501 91 aa0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 ALDH3A1P30838 453 aa0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 Q3ZCU0 254 aa0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 RPP25LQ8N5L8 163 aaKnown RBP0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 ACOT12Q8WYK0 555 aa0.34□□□□□ -2.36
RNU4-28P-201ENST00000364739 TONSLQ96HA7 1378 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 ATP8B1O43520 1251 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 ATP6V1G2O95670 118 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 IVLP07476 585 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 SLCO1A2P46721 670 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 FKBP1AP62942 108 aaKnown RBP0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 CLEC12BQ2HXU8 276 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 FAM45BPQ6NSW5 357 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 BOD1L2Q8IYS8 172 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms