RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DOLPP1Q86YN1 238 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 FADS6Q8N9I5 356 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 REPIN1Q9BWE0 567 aaKnown RBP11.79□□□□□ -0.52
COL6A1-201ENST00000361866 J3QR06 171 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 TMPRSS2O15393 492 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
COL6A1-201ENST00000361866 CTAG1AP78358 180 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 ZBTB34Q8NCN2 500 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 QTRT1Q9BXR0 403 aaKnown RBP11.79□□□□□ -0.52
COL6A1-201ENST00000361866 NPCDR1Q9BY65 106 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 CT45A10P0DMU9 189 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 CTSSP25774 331 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 OTX1P32242 354 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-201ENST00000361866 UCP2P55851 309 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 SLC25A53Q5H9E4 307 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-201ENST00000361866 TMEM167BQ9NRX6 74 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
COL6A1-201ENST00000361866 AMBPP02760 352 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 FCER1GP30273 86 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 PRDX2P32119 198 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 LINC00596Q86U02 117 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 LRTM2Q8N967 370 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 DNASE2BQ8WZ79 361 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 HIF1ANQ9NWT6 349 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 BDP1A6H8Y1 2624 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 RAMP3O60896 148 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 ST6GALNAC3Q8NDV1 305 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 CCL17Q92583 94 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 RRHO14718 337 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 OR5P3Q8WZ94 311 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 PRR14LQ5THK1 2151 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
COL6A1-201ENST00000361866 LYL1P12980 280 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 SRIP30626 198 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 STARD6P59095 220 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 COL5A1-AS1Q5SY13 56 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
COL6A1-201ENST00000361866 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 A0A0G2JRQ6 117 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 WNT10AQ9GZT5 417 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 OPN3Q9H1Y3 402 aaPredicted RBP11.77□□□□□ -0.52
COL6A1-201ENST00000361866 OR6C3Q9NZP0 311 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 IL19Q9UHD0 177 aa11.77□□□□□ -0.52
COL6A1-201ENST00000361866 IGLV3-12A0A075B6K2 115 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 CRYGSP22914 178 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 CFPP27918 469 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 RPP25LQ8N5L8 163 aaKnown RBP11.77□□□□□ -0.53
COL6A1-201ENST00000361866 HPRT1P00492 218 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 APCSP02743 223 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 SPATA45Q537H7 98 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 MMD2Q8IY49 270 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 SIGLEC12Q96PQ1 595 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 ZPBPQ9BS86 351 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 NDUFAF3Q9BU61 184 aa11.77□□□□□ -0.53
COL6A1-201ENST00000361866 SCO2A0A1W2PP80 73 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 BMPR1BO00238 502 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 UMODP07911 640 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 NUBP1P53384 320 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 JOSD1Q15040 202 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-201ENST00000361866 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 TMEM50AO95807 157 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 RBP4P02753 201 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 ADH4P08319 380 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 HTR1DP28221 377 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 RAB7AP51149 207 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 GTF2H5Q6ZYL4 71 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 TRAV24A0A0B4J272 114 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 FAM90A26D6RGX4 464 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 IGLV3-19P01714 112 aa11.76□□□□□ -0.53
COL6A1-201ENST00000361866 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
COL6A1-201ENST00000361866 K7EQM0 130 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 SP1P08047 785 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 IL3RAP26951 378 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 PTGDSP41222 190 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 KLF3P57682 345 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 TNFAIP6P98066 277 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 IBA57Q5T440 356 aaKnown RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 Q6ZRM9 215 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 SAXO1Q8IYX7 474 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 ZADH2Q8N4Q0 377 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 EGLN1Q9GZT9 426 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms