RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 TM4SF20Q53R12 229 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 TIMM23BQ5SRD1 257 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 CHD5Q8TDI0 1954 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 TMEM78Q5T7P6 136 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 ACP7Q6ZNF0 438 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 OR10J6PQ8NGY7 276 aa17.92■□□□□ 0.46
SMURF1-201ENST00000361125 MTCL1Q9Y4B5 1905 aaKnown RBP17.91■□□□□ 0.46
SMURF1-201ENST00000361125 CELA3BP08861 270 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 APOBEC3AP31941 199 aaPredicted RBP17.91■□□□□ 0.46
SMURF1-201ENST00000361125 IGHV1-2P23083 117 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 PDLIM4P50479 330 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 RND3P61587 244 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 EBLN2Q6P2I7 272 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 HIST1H2BAQ96A08 127 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 J3QR89 54 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 CEACAM1P13688 526 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 HAX1O00165 279 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 LIPFP07098 398 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 BSPH1Q075Z2 132 aa17.91■□□□□ 0.46
SMURF1-201ENST00000361125 TRAV14DV4A0A0A6YYC5 116 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 ARL14EPLP0DKL9 152 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 GAS1P54826 345 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 TNFSF10P50591 281 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 MFAP2P55001 183 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 GTF2H5Q6ZYL4 71 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 ADAM11O75078 769 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 MFAP4P55083 255 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 OR4C13Q8NGP0 309 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 MSGN1A6NI15 193 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 IBA57Q5T440 356 aaKnown RBP17.9■□□□□ 0.46
SMURF1-201ENST00000361125 MYOZ3Q8TDC0 251 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 TMEM186Q96B77 213 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 MESP1Q9BRJ9 268 aa17.9■□□□□ 0.46
SMURF1-201ENST00000361125 LYPD3O95274 346 aa17.89■□□□□ 0.46
SMURF1-201ENST00000361125 IGHV3OR16-12A0A075B7B8 117 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 SCGB1D4Q6XE38 83 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 WDYHV1Q96HA8 205 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 TCF19Q9Y242 345 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 BET1LQ9NYM9 111 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 SELENOTP62341 195 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 FAM209BQ5JX69 171 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 PQLC2Q6ZP29 291 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 LSM10Q969L4 123 aaKnown RBP17.89■□□□□ 0.45
SMURF1-201ENST00000361125 RTN4RQ9BZR6 473 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 TMEM106BQ9NUM4 274 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 A0A087WV48 116 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 CRXO43186 299 aaPredicted RBP17.89■□□□□ 0.45
SMURF1-201ENST00000361125 GREB1Q4ZG55 1949 aa17.89■□□□□ 0.45
SMURF1-201ENST00000361125 SMAD7O15105 426 aaKnown RBP17.88■□□□□ 0.45
SMURF1-201ENST00000361125 HSPB8Q9UJY1 196 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 IGHV2OR16-5A0A0B4J2B6 119 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 GLRXP35754 106 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 MEF2BQ02080 365 aaPredicted RBP17.88■□□□□ 0.45
SMURF1-201ENST00000361125 ATP5G2Q06055 141 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 C9orf106Q8NAJ2 232 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 HSPB7Q9UBY9 170 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 A1L4Q6 167 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 FAM90A26D6RGX4 464 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 EFNB1P98172 346 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 ZNF343Q6P1L6 599 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 FAM57AQ8TBR7 257 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 IGKV3D-15A0A087WSY6 115 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 RNF222A6NCQ9 220 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 IGKV3-15P01624 115 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 HERVK_113P61574 105 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 FXYD3Q14802 87 aa17.88■□□□□ 0.45
SMURF1-201ENST00000361125 M0QZK8 103 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 GGCTO75223 188 aaKnown RBP17.87■□□□□ 0.45
SMURF1-201ENST00000361125 DNAJC4Q9NNZ3 241 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 CARHSP1Q9Y2V2 147 aaKnown RBP17.87■□□□□ 0.45
SMURF1-201ENST00000361125 SS18L1O75177 396 aaPredicted RBP17.87■□□□□ 0.45
SMURF1-201ENST00000361125 IGHV3-23P01764 117 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 LCN2P80188 198 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 SGK494Q96LW2 274 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 OR51M1Q9H341 326 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 BPIFA4PQ86YQ2 179 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 VN1R17PQ8TDU5 208 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 OTOFQ9HC10 1997 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 A0A1W2PS18 150 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 KIR2DL2P43627 348 aaPredicted RBP17.87■□□□□ 0.45
SMURF1-201ENST00000361125 ATRAIDQ6UW56 229 aa17.87■□□□□ 0.45
SMURF1-201ENST00000361125 IGHV3-35A0A0C4DH35 117 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 UCP3P55916 312 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 FAM216BQ8N7L0 139 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 PAM16Q9Y3D7 125 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 RAB24Q969Q5 203 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 C1QTNF5Q9BXJ0 243 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 GP6Q9HCN6 339 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 PROB1E7EW31 1015 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 J3QW42 95 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 PSMB2P49721 201 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 RPLP1P05386 114 aaKnown RBP17.86■□□□□ 0.45
SMURF1-201ENST00000361125 PGLYRP4Q96LB8 373 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 KNTC1P50748 2209 aa17.86■□□□□ 0.45
SMURF1-201ENST00000361125 C12orf77C9JDV5 145 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 LHX2P50458 406 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 SMIM8Q96KF7 97 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 TBX15Q96SF7 602 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 KBTBD11O94819 623 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 TMEM56-RWDD3S4R434 201 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms