RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RSG1Q9BU20 258 aa6.06□□□□□ -1.44
CLCN3-202ENST00000360642 TUBG2Q9NRH3 451 aa6.06□□□□□ -1.44
CLCN3-202ENST00000360642 RPRMQ9NS64 109 aa6.06□□□□□ -1.44
CLCN3-202ENST00000360642 KCNIP1Q9NZI2 227 aa6.06□□□□□ -1.44
CLCN3-202ENST00000360642 OR14J1Q9UGF5 321 aa6.06□□□□□ -1.44
CLCN3-202ENST00000360642 RBM7Q9Y580 266 aaKnown RBP6.06□□□□□ -1.44
CLCN3-202ENST00000360642 A0A087WWC5 75 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 A0A1W2PPE3 182 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 RAMP3O60896 148 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 EIF3GO75821 320 aaKnown RBP eCLIP6.05□□□□□ -1.44
CLCN3-202ENST00000360642 IGLV1-44P01699 117 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 FBP1P09467 338 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 OR3A1P47881 315 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 CCL11P51671 97 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 UBE2KP61086 200 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 RPL30P62888 115 aaKnown RBP6.05□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF726P1Q15940 193 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 WDR82Q6UXN9 313 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 TMEM14EPQ6UXP3 125 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 C1QL4Q86Z23 238 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 CYB561D1Q8N8Q1 229 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 CXXC4Q9H2H0 198 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 VSIRQ9H7M9 311 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 CACNA1HO95180 2353 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 SPTBN2O15020 2390 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 IGHV2-5P01817 119 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 TFF1P04155 84 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 MEOX2P50222 304 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 RAB2AP61019 212 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 HBG1P69891 147 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 HBG2P69892 147 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 SERF2P84101 59 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 AESQ08117 197 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 HEPN1Q6WQI6 88 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 SCGB1C1Q8TD33 95 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 RAB39BQ96DA2 213 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 WDR61Q9GZS3 305 aaKnown RBP6.05□□□□□ -1.44
CLCN3-202ENST00000360642 ASCL3Q9NQ33 180 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 KIAA2026Q5HYC2 2103 aa6.05□□□□□ -1.44
CLCN3-202ENST00000360642 PCP4L1A6NKN8 68 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 PTBP3O95758 552 aaKnown RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 HBZP02008 142 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 CECR9P0C854 216 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 WT1P19544 449 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 PAX5Q02548 391 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 TNFRSF9Q07011 255 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 FOXF2Q12947 444 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 FAM53AQ6NSI3 398 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SSX7Q7RTT5 188 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 CENPVQ7Z7K6 275 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF429Q86V71 674 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 CNEP1R1Q8N9A8 125 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 OR2D2Q9H210 308 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SRD5A1P18405 259 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 DLK1P80370 383 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SLC25A24Q6NUK1 477 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SLC35E3Q7Z769 313 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 LURAP1Q96LR2 239 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 OR4C12Q96R67 309 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 RBKSQ9H477 322 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 METTL1Q9UBP6 276 aaKnown RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 GTF3C1Q12789 2109 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 DMXL2Q8TDJ6 3036 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 TRAV17A0A0B4J275 112 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 PMS2P5A8MQ11 134 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 TNFSF13O75888 250 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 CGAP01215 116 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SPANXN5Q5MJ07 72 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 PRAMEF6Q5VXH4 476 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 ADAM5Q6NVV9 412 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 SARAFQ96BY9 339 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 BCL2L14Q9BZR8 327 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 NPFFR1Q9GZQ6 430 aa6.04□□□□□ -1.44
CLCN3-202ENST00000360642 RP1L1Q8IWN7 2480 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-202ENST00000360642 LRRC30A6NM36 301 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF727A8MUV8 499 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 IL2RGP31785 369 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 G6PCP35575 357 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TAGLN2P37802 199 aaKnown RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 HNF4GQ14541 408 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TMEM41BQ5BJD5 291 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TCTEX1D1Q8N7M0 179 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TAF15Q92804 592 aaKnown RBP eCLIP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 AGMATQ9BSE5 352 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 SEBOXQ9HB31 216 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF71Q9NQZ8 489 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TIMM9Q9Y5J7 89 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 GVINP1Q7Z2Y8 2422 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ATMQ13315 3056 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 IGHV2OR16-5A0A0B4J2B6 119 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 IGHV1-18A0A0C4DH31 117 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ODAMA1E959 279 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 C17orf98A8MV24 154 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 C15orf65H3BRN8 121 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 TIMM8AO60220 97 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 BCL2P10415 239 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 GLIPR1P48060 266 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 COL10A1Q03692 680 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms