RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FEVQ99581 238 aa4.32□□□□□ -1.72
CDC42SE2-201ENST00000360515 GABARAPL3Q9BY60 117 aa4.32□□□□□ -1.72
CDC42SE2-201ENST00000360515 GHRLQ9UBU3 117 aa4.32□□□□□ -1.72
CDC42SE2-201ENST00000360515 PRSS47A8MTI9 375 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 RGS5O15539 181 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 RAP2AP10114 183 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 AKR1D1P51857 326 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 BTN1A1Q13410 526 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 SOHLH1Q5JUK2 328 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZFAND1Q8TCF1 268 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 UFD1Q92890 307 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 REEP1Q9H902 201 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 CCDC59Q9P031 241 aaKnown RBP4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 IGHV3-72A0A0B4J1Y9 119 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM212A6NML5 194 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 AIPO00170 330 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 CLN5O75503 358 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 SERPINB10P48595 397 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 HCCSP53701 268 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 CXCR4P61073 352 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 LIPKQ5VXJ0 399 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 DEDD2Q8WXF8 326 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 CCDC140Q96MF4 163 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 FUNDC2Q9BWH2 189 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 YTHDF1Q9BYJ9 559 aaKnown RBP4.31□□□□□ -1.72
CDC42SE2-201ENST00000360515 A0A1W2PQL4 384 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 SLC16A6O15403 523 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 DUSP1P28562 367 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 EXOSC2Q13868 293 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF773Q6PK81 442 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR4D10Q8NGI6 311 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 Q96M66 194 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 ADI1Q9BV57 179 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR51V1Q9H2C8 321 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 RIMS4Q9H426 269 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 SMPD3Q9NY59 655 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 COA4Q9NYJ1 87 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 UFC1Q9Y3C8 167 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 ETV7Q9Y603 341 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 TRBV5-5A0A0J9YX44 114 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 PRKYO43930 277 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 TUSC2O75896 110 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 MYOD1P15172 320 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 REG1BP48304 166 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 NANOS3P60323 173 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 EIF4EBP1Q13541 118 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 XAF1Q6GPH4 301 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 SVOPQ8N4V2 548 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 LFNGQ8NES3 379 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 AQP12BA6NM10 295 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 TEX22C9J3V5 150 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 CREBL2O60519 120 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 APOA1P02647 267 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 MEOX2P50222 304 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 RAB14P61106 215 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 FLI1Q01543 452 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 FXYD3Q14802 87 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 CTF1Q16619 201 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 ECSCRQ19T08 205 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 AQP12AQ8IXF9 295 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 IQCF1Q8N6M8 205 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 FGGYQ96C11 551 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR10C1Q96KK4 312 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 FYTTD1Q96QD9 318 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 CABLES2Q9BTV7 478 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 METTL9Q9H1A3 318 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 X6R8D5 127 aa4.3□□□□□ -1.72
CDC42SE2-201ENST00000360515 MEX3AA1L020 520 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 FABP1P07148 127 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 TRAPPC2P0DI81 140 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 TRAPPC2BP0DI82 140 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 SPP1P10451 314 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ATP5G2Q06055 141 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM179BQ7Z7N9 219 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 PUSL1Q8N0Z8 303 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 STX19Q8N4C7 294 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR52B4Q8NGK2 314 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 KCNG3Q8TAE7 436 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR5B12Q96R08 314 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 METTL1Q9UBP6 276 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 CDK1P06493 297 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 DEFA1P59665 94 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 DEFA3P59666 94 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 SNRPGP62308 76 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM236Q5W0B7 351 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF383Q8NA42 475 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 FANCD2OSQ96PS1 177 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ADAM30Q9UKF2 790 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms