RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 BEX1Q9HBH7 125 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 VPREB3Q9UKI3 123 aa9.9□□□□□ -0.82
NIF3L1-201ENST00000359683 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 SHOXO15266 292 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 OR2F2O95006 317 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 S1PR2O95136 353 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 IGKV1-39P01597 117 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 IGLV2-23P01705 113 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 IGKV1D-39P04432 117 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 ANXA3P12429 323 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 DHRS2Q13268 280 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 POU2AF1Q16633 256 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 C16orf82Q7Z2V1 217 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 LYG2Q86SG7 212 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM219Q86XT9 240 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 MINDY2Q8NBR6 621 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CHPT1Q8WUD6 406 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 HARBI1Q96MB7 349 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM56Q96MV1 263 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 JMJD8Q96S16 334 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CHIAQ9BZP6 476 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 COMMD9Q9P000 198 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM56-RWDD3S4R434 201 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 NDUFA3O95167 84 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 DHFRP00374 187 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 HRASP01112 189 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CRYGBP07316 175 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 NQO2P16083 231 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CNTFRP26992 372 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TRIM16LQ309B1 348 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 C4orf46Q504U0 113 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CADM3Q8N126 398 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 LHFPL5Q8TAF8 219 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 DUX5Q96PT3 197 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 AIFM2Q9BRQ8 373 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 C1RLQ9NZP8 487 aa9.89□□□□□ -0.83
NIF3L1-201ENST00000359683 CUBNO60494 3623 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 RRHO14718 337 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 NBR2O15453 112 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 PRAF2O60831 178 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 SPDEFO95238 335 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 DUS4LO95620 317 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 HLA-AP01891 365 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 IL6RP08887 468 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 UBE2KP61086 200 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 PSG5Q15238 335 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 MMDQ15546 238 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 ANKRD55Q3KP44 614 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 SELENOHQ8IZQ5 122 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 LGI3Q8N145 548 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 LRTM2Q8N967 370 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 Q8N9W7 124 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 TEX45Q8NA69 505 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 OR52B4Q8NGK2 314 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 RBPMSQ93062 196 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 R3HDM4Q96D70 268 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 SEC22AQ96IW7 307 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 RHOVQ96L33 236 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 PRR13Q9NZ81 148 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 MOB4Q9Y3A3 225 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 STAB1Q9NY15 2570 aa9.88□□□□□ -0.83
NIF3L1-201ENST00000359683 A0A0B4J2A0 478 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 NCBP2LA6PVI3 153 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 FGF16O43320 207 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 TCF21O43680 179 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 CHST1O43916 411 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 AMY1AP04745 511 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 SRPXP78539 464 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 VKORC1L1Q8N0U8 176 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 PUSL1Q8N0Z8 303 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 FAM71E2Q8N5Q1 922 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 ZNF431Q8TF32 576 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 MITD1Q8WV92 249 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM158Q8WZ71 300 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 SEC22CQ9BRL7 303 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 RAB18Q9NP72 206 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 SHPKQ9UHJ6 478 aa9.87□□□□□ -0.83
NIF3L1-201ENST00000359683 PIGBOS1A0A0B4J2F0 54 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 MARCH11A6NNE9 402 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 SNRPGP15A8MWD9 76 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 M0QZK8 103 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 SLC25A17O43808 307 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 GPR137BO60478 399 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 ATG12O94817 140 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 KRASP01116 189 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 IGKV1-5P01602 117 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 RNASE1P07998 156 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 SAA1P0DJI8 122 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 G6PCP35575 357 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 UBA52P62987 128 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 C5orf64Q2M2E5 130 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 VMA21Q3ZAQ7 101 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM268Q5VZI3 342 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms