RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CRYZL1O95825 349 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 KRASP01116 189 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 NQO2P16083 231 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 DVL1P1P54792 670 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 DLX1P56177 255 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 ZNF345Q14585 488 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 LGALSLQ3ZCW2 172 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 INO80EQ8NBZ0 244 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 RNF126Q9BV68 326 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 SIRPDQ9H106 197 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 A0A0D9SG52 128 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 E5RGE8 158 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 PITX3O75364 302 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 TOX4O94842 621 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 OR2F2O95006 317 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 HRASP01112 189 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 GAPDHP04406 335 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 ARG1P05089 322 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 P0C879 139 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 CXCL2P19875 107 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 PVALBP20472 110 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 CEACAM3P40198 252 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 REG1BP48304 166 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 RAB13P51153 203 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 ARHGDIBP52566 201 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 LOXL1Q08397 574 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 OR2F1Q13607 317 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 ACOT7LQ6ZUV0 252 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 OR4P4Q8NGL7 312 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 RPEQ96AT9 228 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 AIFM2Q9BRQ8 373 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 OR5AC2Q9NZP5 309 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 NSG2Q9Y328 171 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 WASHC3Q9Y3C0 194 aa11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-203ENST00000359265 ODF3BA8MYP8 253 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 FAM90A26D6RGX4 464 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 H0YJW9 148 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 H7C2Y5 167 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 HTR1DP28221 377 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 MC5RP33032 325 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 ID3Q02535 119 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 PRB3Q04118 309 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 KLRD1Q13241 179 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 POU2AF1Q16633 256 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 IZUMO4Q1ZYL8 232 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 TMUB2Q71RG4 321 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 OSR1Q8TAX0 266 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 Q96MF0 132 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 REG4Q9BYZ8 158 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 LPAR2Q9HBW0 351 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 MMP26Q9NRE1 261 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 INSIG2Q9Y5U4 225 aa11.22□□□□□ -0.61
PDLIM5-203ENST00000359265 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 LEUTXA8MZ59 168 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 B4DSR2 109 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 MMP9P14780 707 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 S100A11P31949 105 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 VAMP2P63027 116 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 OPCMLQ14982 345 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 MIDNQ504T8 468 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 Q6ZRM9 215 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 KCNRGQ8N5I3 272 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 GON7Q9BXV9 100 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 ARL6Q9H0F7 186 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
PDLIM5-203ENST00000359265 CUBNO60494 3623 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 A0A096LNT2 108 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 LY6LH3BQJ8 138 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 SHOXO15266 292 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 SSSCA1O60232 199 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 TSC22D2O75157 780 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 RBMXL2O75526 392 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 MED6O75586 246 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 NXPH3O95157 252 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 P2RY1P47900 373 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 SSX9Q7RTT3 188 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms