RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CLLU1Q5K131 121 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 SPNS3Q6ZMD2 512 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 ZNF429Q86V71 674 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 PDPNQ86YL7 162 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 BAP18Q8IXM2 172 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 OR4A16Q8NH70 328 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
CCDC197-201ENST00000359253 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
CCDC197-201ENST00000359253 ANKRD17O75179 2603 aaKnown RBP10.99□□□□□ -0.65
CCDC197-201ENST00000359253 C22orf46C9J442 243 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 NDUFS7O75251 213 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 FGF2P09038 288 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 RPP30P78346 268 aaKnown RBP10.99□□□□□ -0.65
CCDC197-201ENST00000359253 EWSR1Q01844 656 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC197-201ENST00000359253 TMEM177Q53S58 311 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 UTF1Q5T230 341 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 C1orf229Q6ZS94 237 aaPredicted RBP10.99□□□□□ -0.65
CCDC197-201ENST00000359253 STX12Q86Y82 276 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 TGIF2LXQ8IUE1 241 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 OR8H3Q8N146 312 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 TMEM252Q8N6L7 170 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 UBAC2Q8NBM4 344 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 OR11H6Q8NGC7 330 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 OR4C13Q8NGP0 309 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 VSTM2AQ8TAG5 236 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 CYTL1Q9NRR1 136 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 FKBP11Q9NYL4 201 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 ONECUT1Q9UBC0 465 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 POLQO75417 2590 aa10.99□□□□□ -0.65
CCDC197-201ENST00000359253 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 BUB1B-PAK6H3BSN5 160 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
CCDC197-201ENST00000359253 SPDEFO95238 335 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CRYZL1O95825 349 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CEACAM3P40198 252 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 HTR2BP41595 481 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CAV2P51636 162 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 PAX9P55771 341 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 SPCS3P61009 180 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 ZNF266Q14584 549 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CLEC2AQ6UVW9 174 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 ZNF525Q8N782 197 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 OR4A5Q8NH83 315 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 FAM168AQ92567 244 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 LHX4Q969G2 390 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 RHOVQ96L33 236 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CLCC1Q96S66 551 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 BET1LQ9NYM9 111 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 PSENENQ9NZ42 101 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 FBXL17Q9UF56 701 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 WASHC3Q9Y3C0 194 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 CREBBPQ92793 2442 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 TEX15Q9BXT5 2789 aa10.98□□□□□ -0.65
CCDC197-201ENST00000359253 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 H0YJW9 148 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 DFFBO76075 338 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 IL6RP08887 468 aaPredicted RBP10.97□□□□□ -0.65
CCDC197-201ENST00000359253 LGALS7P47929 136 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 SULT1A1P50225 295 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 ATP5J2P56134 94 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 ATP5IP56385 69 aaPredicted RBP10.97□□□□□ -0.65
CCDC197-201ENST00000359253 LMO4P61968 165 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 STPG2Q8N412 459 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 FLYWCH2Q96CP2 140 aaKnown RBP10.97□□□□□ -0.65
CCDC197-201ENST00000359253 RNF5Q99942 180 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 BPESC1Q9GZL8 116 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 TMEM140Q9NV12 185 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 PRNDQ9UKY0 176 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
CCDC197-201ENST00000359253 ZNF257Q9Y2Q1 563 aa10.97□□□□□ -0.65
CCDC197-201ENST00000359253 YLPM1P49750 1951 aaKnown RBP10.96□□□□□ -0.65
CCDC197-201ENST00000359253 LINC00862A6NCI5 91 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 LEUTXA8MZ59 168 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 OOSP1A8MZH6 123 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 SHOXO15266 292 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 KCNAB3O43448 404 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 LINC00205P59089 165 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 HBG1P69891 147 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 HBG2P69892 147 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 RELBQ01201 579 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 PUSL1Q8N0Z8 303 aaKnown RBP10.96□□□□□ -0.65
CCDC197-201ENST00000359253 Q8N7P7 452 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 DTD1Q8TEA8 209 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 C10orf105Q8TEF2 133 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 MRPL20Q9BYC9 149 aaKnown RBP10.96□□□□□ -0.65
CCDC197-201ENST00000359253 ARV1Q9H2C2 271 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 RBKSQ9H477 322 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 MED9Q9NWA0 146 aa10.96□□□□□ -0.65
CCDC197-201ENST00000359253 ARID1AO14497 2285 aa10.95□□□□□ -0.66
CCDC197-201ENST00000359253 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
CCDC197-201ENST00000359253 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
CCDC197-201ENST00000359253 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
CCDC197-201ENST00000359253 VWC2LB2RUY7 222 aa10.95□□□□□ -0.66
CCDC197-201ENST00000359253 H7C2Y5 167 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms