RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 WDR25Q64LD2 544 aaPredicted RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 RNF115Q9Y4L5 304 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 FAM90A27PA6NNH2 459 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 FABP4P15090 132 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 ERHP84090 104 aaKnown RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 SLC35E1Q96K37 410 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 ZNF320A2RRD8 509 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 LINC00473A8K010 186 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 F6UZH7 168 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 OR4A8P0C604 315 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 HABP2Q14520 560 aaPredicted RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 RBMXL3Q8N7X1 1067 aaKnown RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 C22orf15Q8WYQ4 148 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 MRPL37Q9BZE1 423 aaKnown RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 J3QR06 171 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 GNB1P62873 340 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 FAM78BQ5VT40 261 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 GAL3ST2Q9H3Q3 398 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 SIRT7Q9NRC8 400 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 CISD1Q9NZ45 108 aaKnown RBP9.33□□□□□ -0.92
SSU72-202ENST00000359060 SLC25A10Q9UBX3 287 aaPredicted RBP9.33□□□□□ -0.92
SSU72-202ENST00000359060 SLC25A15Q9Y619 301 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 B4DEV8 164 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 THBS3P49746 956 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 HTD2P86397 168 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 KRTCAP3Q53RY4 240 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 MRPL41Q8IXM3 137 aaKnown RBP9.33□□□□□ -0.92
SSU72-202ENST00000359060 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 ADTRPQ96IZ2 230 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 MANBALQ9NQG1 85 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 PXMP4Q9Y6I8 212 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 TNCP24821 2201 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 SRRM5B3KS81 715 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 OR5G3P0C626 314 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 CD40P25942 277 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 MORN2Q502X0 79 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 DOK5Q9P104 306 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 SSUH2Q9Y2M2 353 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 WDFY4Q6ZS81 3184 aa9.33□□□□□ -0.92
SSU72-202ENST00000359060 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
SSU72-202ENST00000359060 ZNF474Q6S9Z5 364 aaPredicted RBP9.32□□□□□ -0.92
SSU72-202ENST00000359060 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 CORO2AQ92828 525 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 SFXN3Q9BWM7 321 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 HSPB7Q9UBY9 170 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 COL6A3P12111 3177 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 APELAP0DMC3 54 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 CEACAM1P13688 526 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 OR51B2Q9Y5P1 312 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 NDUFB4O95168 129 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 SNRPCP09234 159 aaKnown RBP9.32□□□□□ -0.92
SSU72-202ENST00000359060 DUTP33316 252 aaKnown RBP9.32□□□□□ -0.92
SSU72-202ENST00000359060 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
SSU72-202ENST00000359060 IGKV1D-17A0A075B6S4 117 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
SSU72-202ENST00000359060 RHOBP62745 196 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 ZNF90Q03938 601 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 ACSM6Q6P461 480 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 RPP25LQ8N5L8 163 aaKnown RBP9.31□□□□□ -0.92
SSU72-202ENST00000359060 Q8WTZ3 238 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 GATAD1Q8WUU5 269 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 PARLQ9H300 379 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 IGF2RP11717 2491 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 TNFSF13O75888 250 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 TEPPQ6URK8 271 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 NPVFQ9HCQ7 196 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 PPIAL4EA0A075B759 164 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 IGHV3-72A0A0B4J1Y9 119 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 PPIAL4DF5H284 164 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 FABP1P07148 127 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 PPIAL4FP0DN26 164 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 PPIAL4AQ9Y536 164 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 LY86O95711 162 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 OPRK1P41145 380 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 OR10A7Q8NGE5 316 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 IDI2-AS1Q9NZ38 188 aa9.31□□□□□ -0.92
SSU72-202ENST00000359060 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
SSU72-202ENST00000359060 SPINK4O60575 86 aa9.3□□□□□ -0.92
SSU72-202ENST00000359060 COX7A1P24310 79 aa9.3□□□□□ -0.92
SSU72-202ENST00000359060 IL3RAP26951 378 aa9.3□□□□□ -0.92
SSU72-202ENST00000359060 HSPE1P61604 102 aaKnown RBP9.3□□□□□ -0.92
SSU72-202ENST00000359060 RTP5Q14D33 572 aa9.3□□□□□ -0.92
SSU72-202ENST00000359060 MBNL2Q5VZF2 373 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms