RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MRPL18Q9H0U6 180 aaKnown RBP11.68□□□□□ -0.54
VCP-201ENST00000358901 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 LRRC37A2A6NM11 1700 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 LOC285556D6RIA3 1793 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 CD40P25942 277 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 SRSF3P84103 164 aaKnown RBP11.68□□□□□ -0.54
VCP-201ENST00000358901 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 SIGLEC12Q96PQ1 595 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 EP400Q96L91 3159 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
VCP-201ENST00000358901 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
VCP-201ENST00000358901 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 A0A1W2PRS3 328 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 SLC25A17O43808 307 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 ZNRF1Q8ND25 227 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 HIGD1AQ9Y241 93 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 FER1L5A0AVI2 2057 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 ABCA4P78363 2273 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 PI4KAP42356 2102 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 OR10S1Q8NGN2 331 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 KLHDC3Q9BQ90 382 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 NUBP1P53384 320 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 RPL30P62888 115 aaKnown RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 LBHQ53QV2 105 aaPredicted RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 COL5A1-AS1Q5SY13 56 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 GDF15Q99988 308 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
VCP-201ENST00000358901 LINC00470Q9BZP3 86 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 TMEM97Q5BJF2 176 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 IMMP1LQ96LU5 166 aa11.67□□□□□ -0.54
VCP-201ENST00000358901 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 SPSB4Q96A44 273 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 HSPB8Q9UJY1 196 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 DMRT1Q9Y5R6 373 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 MC5RP33032 325 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 TCTAP57738 103 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 SSX8Q7RTT4 187 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
VCP-201ENST00000358901 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 DNAJC4Q9NNZ3 241 aa11.66□□□□□ -0.54
VCP-201ENST00000358901 F2RL2O00254 374 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 RRHO14718 337 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 KRTCAP3Q53RY4 240 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 ARTNQ5T4W7 220 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 C1orf185Q5T7R7 199 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 FADS6Q8N9I5 356 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 ZNF430Q9H8G1 570 aaPredicted RBP11.65□□□□□ -0.54
VCP-201ENST00000358901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.544e-7■■■■□ 26.3
VCP-201ENST00000358901 IGLV3-12A0A075B6K2 115 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 MMD2Q8IY49 270 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 NABP2Q9BQ15 211 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
VCP-201ENST00000358901 HILPDAQ9Y5L2 63 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
VCP-201ENST00000358901 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 SRIP30626 198 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 SLC25A53Q5H9E4 307 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 SLC35E4Q6ICL7 350 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
VCP-201ENST00000358901 ZNF441Q8N8Z8 693 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 TTC28Q96AY4 2481 aa11.65□□□□□ -0.54
VCP-201ENST00000358901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.55
VCP-201ENST00000358901 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 H3BTX0 84 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 CDX4O14627 284 aaPredicted RBP11.65□□□□□ -0.55
VCP-201ENST00000358901 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 RBM14Q96PK6 669 aaKnown RBP11.65□□□□□ -0.55
VCP-201ENST00000358901 SCNM1Q9BWG6 230 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 C1QTNF5Q9BXJ0 243 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 CBLN4Q9NTU7 201 aa11.65□□□□□ -0.55
VCP-201ENST00000358901 A0A0A6YYD4 124 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 DLL1O00548 723 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 TCF21O43680 179 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 CBLN1P23435 193 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 RELBQ01201 579 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 RPL39P5Q59GN2 51 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms