RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 WFIKKN1Q96NZ8 548 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 HSPB9Q9BQS6 159 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 RPL8P62917 257 aaKnown RBP8.41□□□□□ -1.06
CHD3-202ENST00000358181 QTRT1Q9BXR0 403 aaKnown RBP8.41□□□□□ -1.06
CHD3-202ENST00000358181 GSX2Q9BZM3 304 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 TRAV8-2A0A0B4J237 113 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 HRKO00198 91 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 DEGS2Q6QHC5 323 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 ERASQ7Z444 233 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 SCMH1Q96GD3 660 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 VAX2Q9UIW0 290 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 C22orf46C9J442 243 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 PLPPR5Q32ZL2 321 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 COX11Q9Y6N1 276 aa8.4□□□□□ -1.06
CHD3-202ENST00000358181 LIPFP07098 398 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 ADAD2Q8NCV1 583 aaKnown RBP8.4□□□□□ -1.07
CHD3-202ENST00000358181 WDR54Q9H977 334 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 ZNF114Q8NC26 417 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 IL19Q9UHD0 177 aa8.4□□□□□ -1.07
CHD3-202ENST00000358181 MEF2BQ02080 365 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 SRSF4Q08170 494 aaKnown RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 ZNF585BQ52M93 769 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 FBXL7Q9UJT9 491 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 TCRBV16S1A1N1A0A5B0 115 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 NDUFB4O95168 129 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 C1QBP02746 253 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 C1orf122Q6ZSJ8 110 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 LIMS2Q7Z4I7 341 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 RAB24Q969Q5 203 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 PAPPA2Q9BXP8 1791 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 SMIM6P0DI80 62 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 PRADC1Q9BSG0 188 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 FGF20Q9NP95 211 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 NHSL1Q5SYE7 1610 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 LOC102723996A0A087X1L8 192 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 H3BMM0 161 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 ZP3P21754 424 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 PARD6GQ9BYG4 376 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 LINC00527Q9UJ94 153 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 TMEM250H0YL14 139 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 CISD3P0C7P0 127 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 CD24P25063 80 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 ARRDC1Q8N5I2 433 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 DSPPQ9NZW4 1301 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 VWC2LB2RUY7 222 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 GGTLC3B5MD39 225 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 MIC13Q5XKP0 118 aa8.39□□□□□ -1.07
CHD3-202ENST00000358181 ZNF275Q9NSD4 429 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 PTPRZ1P23471 2315 aaPredicted RBP8.39□□□□□ -1.07
CHD3-202ENST00000358181 CD28P10747 220 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 CFHR3Q02985 330 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 AWAT1Q58HT5 328 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 BRWD1Q9NSI6 2320 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 ZFC3H1O60293 1989 aaKnown RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 TMEM174Q8WUU8 243 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 SLC25A28Q96A46 364 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 SIGLEC12Q96PQ1 595 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 MDC1Q14676 2089 aaKnown RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 PAX4O43316 350 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 HPRT1P00492 218 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 SRSF6Q13247 344 aaKnown RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 UBE2E2Q96LR5 201 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 TRPM6Q9BX84 2022 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 TCRBV5S2A0A599 114 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 MESTQ5EB52 335 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 KCNE5Q9UJ90 142 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 APOHP02749 345 aaPredicted RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 GLRXP35754 106 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 EWSR1Q01844 656 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHD3-202ENST00000358181 ICAM4Q14773 271 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 C10orf111Q8N326 155 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 LRRC3BQ96PB8 259 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 AICDAQ9GZX7 198 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 KIAA1551Q9HCM1 1747 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 RPS20P60866 119 aaKnown RBP8.38□□□□□ -1.07
CHD3-202ENST00000358181 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
CHD3-202ENST00000358181 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 ZAR1LA6NP61 321 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms