RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
CCNE1-202ENST00000357943 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 RNF5Q99942 180 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 BEX1Q9HBH7 125 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 SH2D7A6NKC9 451 aaPredicted RBP11.83□□□□□ -0.52
CCNE1-202ENST00000357943 NBR2O15453 112 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 NDUFA3O95167 84 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 HPRT1P00492 218 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 LPAR6P43657 344 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 LGALS7P47929 136 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 MECP2P51608 486 aaKnown RBP11.83□□□□□ -0.52
CCNE1-202ENST00000357943 BLCAPP62952 87 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 DHODHQ02127 395 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 PSG5Q15238 335 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 FAM71E2Q8N5Q1 922 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 C5orf56Q8N8D9 126 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 NPBQ8NG41 125 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
CCNE1-202ENST00000357943 SLC25A17O43808 307 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 SERPINE2P07093 398 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 VAMP1P23763 118 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 UCP1P25874 307 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 TAS2R31P59538 309 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 C11orf88Q6PI97 169 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 SSX9Q7RTT3 188 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 TSNAXQ99598 290 aaKnown RBP11.82□□□□□ -0.52
CCNE1-202ENST00000357943 RAB18Q9NP72 206 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 TPSG1Q9NRR2 321 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 FAM212BQ9NTI7 297 aaPredicted RBP11.82□□□□□ -0.52
CCNE1-202ENST00000357943 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 C7orf66A4D0T2 115 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 RRHO14718 337 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 FGF16O43320 207 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 OR4E1P0C645 316 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 SAA1P0DJI8 122 aaPredicted RBP11.82□□□□□ -0.52
CCNE1-202ENST00000357943 RPA2P15927 270 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 Q6ZS46 218 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 LHFPL5Q8TAF8 219 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 RHOVQ96L33 236 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM222Q9H0R3 208 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 KIAA1456Q9P272 454 aa11.82□□□□□ -0.52
CCNE1-202ENST00000357943 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
CCNE1-202ENST00000357943 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 SPDEFO95238 335 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 KRASP01116 189 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 NQO2P16083 231 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 RELBQ01201 579 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM187Q14656 261 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 COMMD9Q9P000 198 aa11.81□□□□□ -0.52
CCNE1-202ENST00000357943 C9orf170A2RU37 121 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 M0QZK8 103 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 FCN1O00602 326 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 PRAF2O60831 178 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 SFT2D2O95562 160 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 CDS2O95674 445 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 HRASP01112 189 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 HLA-AP01891 365 aaKnown RBP11.8□□□□□ -0.52
CCNE1-202ENST00000357943 CRYGBP07316 175 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 G6PCP35575 357 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
CCNE1-202ENST00000357943 UBE2KP61086 200 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 DHRS2Q13268 280 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 PLGLAQ15195 96 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 NDUFA5Q16718 116 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 C4orf46Q504U0 113 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 CASTOR1Q8WTX7 329 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 RASL11BQ9BPW5 248 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 ALX4Q9H161 411 aaPredicted RBP11.8□□□□□ -0.52
CCNE1-202ENST00000357943 SIGLEC9Q9Y336 463 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 FBN1P35555 2871 aaKnown RBP11.8□□□□□ -0.52
CCNE1-202ENST00000357943 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
CCNE1-202ENST00000357943 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 BOLA2-SMG1P6H3BVE0 249 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 IL5P05113 134 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 ANXA3P12429 323 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
CCNE1-202ENST00000357943 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 PPP1R27Q86WC6 154 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms