RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 V9GYH0 126 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 PTPRQQ9UMZ3 2332 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 SOX15O60248 233 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 ANXA7P20073 488 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 RBPMS2Q6ZRY4 209 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 MARCH11A6NNE9 402 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 C15orf65H3BRN8 121 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 SSX5O60225 188 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 SSSCA1O60232 199 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 CA2P00918 260 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
UPF2-202ENST00000357604 PI3P19957 117 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 SIGIRRQ6IA17 410 aa7.47□□□□□ -1.21
UPF2-202ENST00000357604 CDS2O95674 445 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 PTHLHP12272 177 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 ANOS1P23352 680 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 ZNF266Q14584 549 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 RHOVQ96L33 236 aa7.46□□□□□ -1.21
UPF2-202ENST00000357604 TSSC4Q9Y5U2 329 aaPredicted RBP7.46□□□□□ -1.21
UPF2-202ENST00000357604 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
UPF2-202ENST00000357604 ANKRD55Q3KP44 614 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 LRRC37A5PQ49AS3 106 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 OR1L4Q8NGR5 311 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 DTD1Q8TEA8 209 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 UPK2O00526 184 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 TMEM219Q86XT9 240 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
UPF2-202ENST00000357604 MRGPRFQ96AM1 343 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 VSIG4Q9Y279 399 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 RCL1Q9Y2P8 373 aaKnown RBP7.46□□□□□ -1.22
UPF2-202ENST00000357604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.46□□□□□ -1.22
UPF2-202ENST00000357604 NXPH3O95157 252 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 VENTXO95231 258 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 OR9G9P0C7N8 305 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 SLC25A4P12235 298 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 MMP9P14780 707 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 LYSMD2Q8IV50 215 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 OR4P4Q8NGL7 312 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 MEGF9Q9H1U4 602 aa7.46□□□□□ -1.22
UPF2-202ENST00000357604 CENPFP49454 3210 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 ELANEP08246 267 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 IAPPP10997 89 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 TAS2R45P59539 299 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SHISA2Q6UWI4 295 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SELENOHQ8IZQ5 122 aaKnown RBP7.45□□□□□ -1.22
UPF2-202ENST00000357604 METTL26Q96S19 204 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 A0A1W2PPR1 153 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 TMEM89A2RUT3 159 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 TSC22D2O75157 780 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 S1PR2O95136 353 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SAA1P0DJI8 122 aaPredicted RBP7.45□□□□□ -1.22
UPF2-202ENST00000357604 HILS1P60008 231 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 OR5AU1Q8NGC0 362 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 AJUBAQ96IF1 538 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 FBXL17Q9UF56 701 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 MYO7BQ6PIF6 2116 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 PCNTO95613 3336 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 ODF3BA8MYP8 253 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 CD5P06127 495 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 RAB9AP51151 201 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 ZFP69Q49AA0 526 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 LHFPL4Q7Z7J7 247 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 IFI27L2Q9H2X8 130 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 GPR132Q9UNW8 380 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 COX7A2P2O60397 106 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SLC25A6P12236 298 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 MYOD1P15172 320 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 SLC24A4Q8NFF2 622 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 ACY3Q96HD9 319 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 C20orf24Q9BUV8 137 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 RBM38Q9H0Z9 239 aaKnown RBP7.45□□□□□ -1.22
UPF2-202ENST00000357604 WSB1Q9Y6I7 421 aa7.45□□□□□ -1.22
UPF2-202ENST00000357604 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 A0A1W2PRX2 142 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 ZNF320A2RRD8 509 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 IGHV4-59P01825 116 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 HLA-DRB1P01911 266 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 S100A11P31949 105 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 OR5T1Q8NG75 326 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 ALX4Q9H161 411 aaPredicted RBP7.44□□□□□ -1.22
UPF2-202ENST00000357604 GSX1Q9H4S2 264 aaPredicted RBP7.44□□□□□ -1.22
UPF2-202ENST00000357604 MBP02144 154 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 PRB3Q04118 309 aaPredicted RBP7.44□□□□□ -1.22
UPF2-202ENST00000357604 OR8G2PQ6IF36 304 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 TRIM63Q969Q1 353 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 SLC6A1P30531 599 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 IER3P46695 156 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 PPP1R1AQ13522 171 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 DUX5Q96PT3 197 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 ZNF407Q9C0G0 2248 aa7.44□□□□□ -1.22
UPF2-202ENST00000357604 K7EQM0 130 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms