RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OSR1Q8TAX0 266 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-202ENST00000357475 BTBD17A6NE02 478 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 SH2D7A6NKC9 451 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-202ENST00000357475 CDS2O95674 445 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 PSG5Q15238 335 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 LIAT1Q6ZQX7 453 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 SELENOHQ8IZQ5 122 aaKnown RBP20.22■□□□□ 0.83
SSBP3-202ENST00000357475 R3HDM4Q96D70 268 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 FAM212BQ9NTI7 297 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-202ENST00000357475 POMT1Q9Y6A1 747 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 NCBP2LA6PVI3 153 aaKnown RBP20.22■□□□□ 0.83
SSBP3-202ENST00000357475 SLC25A17O43808 307 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 KRASP01116 189 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 RAG2P55895 527 aa20.22■□□□□ 0.83
SSBP3-202ENST00000357475 TAF15Q92804 592 aaKnown RBP eCLIP20.22■□□□□ 0.836e-7■■■■□ 20.6
SSBP3-202ENST00000357475 NBR2O15453 112 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 OR2F2O95006 317 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 IGKV1-5P01602 117 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 AMY1AP04745 511 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 SAA1P0DJI8 122 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-202ENST00000357475 IZUMO4Q1ZYL8 232 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM268Q5VZI3 342 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM86BQ8N661 226 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 Q8N9W7 124 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM56Q96MV1 263 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 FBXL15Q9H469 300 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM56-RWDD3S4R434 201 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 PLXNB1O43157 2135 aa20.21■□□□□ 0.83
SSBP3-202ENST00000357475 A0A0G2JRQ6 117 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 B3GALNT1O75752 331 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 IL5P05113 134 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 ANXA3P12429 323 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 NPBQ8NG41 125 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 SEC22AQ96IW7 307 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 RHOVQ96L33 236 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 RNF5Q99942 180 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 COMMD9Q9P000 198 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 PITPNC1Q9UKF7 332 aa20.2■□□□□ 0.82
SSBP3-202ENST00000357475 MARCH11A6NNE9 402 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 NDUFA3O95167 84 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 CRYGBP07316 175 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 NQO2P16083 231 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 LGALS7P47929 136 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 TATDN3Q17R31 274 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 MRGPRG-AS1Q2M3A8 158 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 FAM71E2Q8N5Q1 922 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 SLC35G3Q8N808 338 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 ZNF431Q8TF32 576 aaPredicted RBP20.19■□□□□ 0.82
SSBP3-202ENST00000357475 TSNAXQ99598 290 aaKnown RBP20.19■□□□□ 0.82
SSBP3-202ENST00000357475 METTL1Q9UBP6 276 aaKnown RBP20.19■□□□□ 0.82
SSBP3-202ENST00000357475 MOB4Q9Y3A3 225 aa20.19■□□□□ 0.82
SSBP3-202ENST00000357475 TRAV3A0A0B4J244 114 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 RRHO14718 337 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 GPR137BO60478 399 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 DUS4LO95620 317 aaKnown RBP20.18■□□□□ 0.82
SSBP3-202ENST00000357475 UBA52P62987 128 aaKnown RBP20.18■□□□□ 0.82
SSBP3-202ENST00000357475 LYZL2Q7Z4W2 148 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 ZNF695Q8IW36 515 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 C5orf56Q8N8D9 126 aa20.18■□□□□ 0.82
SSBP3-202ENST00000357475 RBPMSQ93062 196 aaKnown RBP20.18■□□□□ 0.82
SSBP3-202ENST00000357475 A0A0A6YYJ9 748 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 CLDN34H7C241 214 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 FCN1O00602 326 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 DHFRP00374 187 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 HRASP01112 189 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 UBE2KP61086 200 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 PJVKQ0ZLH3 352 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 POU2AF1Q16633 256 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 OR4A47Q6IF82 309 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 C11orf88Q6PI97 169 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 Q6ZS46 218 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 PUSL1Q8N0Z8 303 aaKnown RBP20.17■□□□□ 0.82
SSBP3-202ENST00000357475 LGI3Q8N145 548 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 DMBX1Q8NFW5 382 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 MITD1Q8WV92 249 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 CLCC1Q96S66 551 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 TMEM140Q9NV12 185 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 ALG5Q9Y673 324 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 TNCP24821 2201 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 TCF21O43680 179 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 BLCAPP62952 87 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 C5orf64Q2M2E5 130 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 SIGLEC9Q9Y336 463 aa20.17■□□□□ 0.82
SSBP3-202ENST00000357475 OR9G9P0C7N8 305 aa20.16■□□□□ 0.82
SSBP3-202ENST00000357475 P0C879 139 aa20.16■□□□□ 0.82
SSBP3-202ENST00000357475 LRTM2Q8N967 370 aa20.16■□□□□ 0.82
SSBP3-202ENST00000357475 MINDY2Q8NBR6 621 aa20.16■□□□□ 0.82
SSBP3-202ENST00000357475 NSG2Q9Y328 171 aa20.16■□□□□ 0.82
SSBP3-202ENST00000357475 SETD2Q9BYW2 2564 aaPredicted RBP20.16■□□□□ 0.82
SSBP3-202ENST00000357475 TET2Q6N021 2002 aaPredicted RBP20.16■□□□□ 0.82
SSBP3-202ENST00000357475 FAM181BA6NEQ2 426 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 PRAF2O60831 178 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 ADAP1O75689 374 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 SPDEFO95238 335 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 RNASE1P07998 156 aaKnown RBP20.15■□□□□ 0.82
SSBP3-202ENST00000357475 MYOD1P15172 320 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 AKR1C2P52895 323 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 ERVK-16P61578 105 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 VMA21Q3ZAQ7 101 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 UXS1Q8NBZ7 420 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms