RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
SMC4-202ENST00000357388 UNC119Q13432 240 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 IZUMO1RA6ND01 250 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 PRR33A8MZF0 331 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 SUMO2P61956 95 aaKnown RBP11.03□□□□□ -0.64
SMC4-202ENST00000357388 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 MEGF9Q9H1U4 602 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
SMC4-202ENST00000357388 LINC00614P0C842 121 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 FAM214BQ7L5A3 538 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 UBE2CO00762 179 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 MPV17P39210 176 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 FMC1Q96HJ9 113 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 TMEM101Q96IK0 257 aa11.02□□□□□ -0.64
SMC4-202ENST00000357388 TRAV9-2A0A087WT02 112 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 OR2H2O95918 312 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 SCTP09683 121 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 ZNF708P17019 499 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 ZNF56Q15929 161 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 IGHV3-21A0A0B4J1V1 117 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 ADRA2AP08913 450 aa11.02□□□□□ -0.65
SMC4-202ENST00000357388 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 GPX1P07203 203 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 IGHV3OR15-7A0A075B7D8 119 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 CKS1BP61024 79 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PLAURQ03405 335 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 ZNF488Q96MN9 340 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PLCH1Q4KWH8 1693 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 MARCH11A6NNE9 402 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 GFRA3O60609 400 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PF4P02776 101 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 CTSSP25774 331 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PDLIM4P50479 330 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PRSS12P56730 875 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 CACNG7P62955 275 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 PCSK4Q6UW60 755 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 FOXC2Q99958 501 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 KLK15Q9H2R5 256 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 ZG16O60844 167 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
SMC4-202ENST00000357388 RPP21Q9H633 154 aaKnown RBP11.01□□□□□ -0.65
SMC4-202ENST00000357388 TCF19Q9Y242 345 aa11.01□□□□□ -0.65
SMC4-202ENST00000357388 A8MWV9 139 aa11□□□□□ -0.65
SMC4-202ENST00000357388 CCL8P80075 99 aa11□□□□□ -0.65
SMC4-202ENST00000357388 FAM219BQ5XKK7 198 aa11□□□□□ -0.65
SMC4-202ENST00000357388 RTN4RQ9BZR6 473 aa11□□□□□ -0.65
SMC4-202ENST00000357388 PATE3B3GLJ2 98 aa11□□□□□ -0.65
SMC4-202ENST00000357388 APOMO95445 188 aa11□□□□□ -0.65
SMC4-202ENST00000357388 LIMS2Q7Z4I7 341 aa11□□□□□ -0.65
SMC4-202ENST00000357388 TMEM190Q8WZ59 177 aa11□□□□□ -0.65
SMC4-202ENST00000357388 FOXD3Q9UJU5 478 aaPredicted RBP11□□□□□ -0.65
SMC4-202ENST00000357388 UPK3AO75631 287 aa11□□□□□ -0.65
SMC4-202ENST00000357388 TFPI2P48307 235 aa11□□□□□ -0.65
SMC4-202ENST00000357388 ATP5J2P56134 94 aa11□□□□□ -0.65
SMC4-202ENST00000357388 NRN1Q9NPD7 142 aa11□□□□□ -0.65
SMC4-202ENST00000357388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
SMC4-202ENST00000357388 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
SMC4-202ENST00000357388 ZNF362Q5T0B9 420 aaPredicted RBP11□□□□□ -0.65
SMC4-202ENST00000357388 Q96M66 194 aa11□□□□□ -0.65
SMC4-202ENST00000357388 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 RNF115Q9Y4L5 304 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 A0A1W2PRS3 328 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 SYNGR3O43761 229 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 HSD52Q0P140 79 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 CIARTQ8N365 385 aaPredicted RBP10.99□□□□□ -0.65
SMC4-202ENST00000357388 PNKDQ8N490 385 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 PLAUP00749 431 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 UCP2P55851 309 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 GAGE2BQ13066 116 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 GAGE2EQ4V326 116 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 FAM71F2Q6NXP2 309 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 FAM159AQ6UWV7 190 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 ORMDL3Q8N138 153 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 TIMP4Q99727 224 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 GAGE2DQ9UEU5 116 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
SMC4-202ENST00000357388 DNM1P46Q6ZS02 220 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 CLDND2Q8NHS1 167 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
SMC4-202ENST00000357388 ODAMA1E959 279 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms