RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GNB4Q9HAV0 340 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 A0A1W2PRE2 83 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 K7EQS6 105 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 ITGB1BP1O14713 200 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 RAMP1O60894 148 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 FBXW9Q5XUX1 488 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 WDYHV1Q96HA8 205 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 MRPL13Q9BYD1 178 aaKnown RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM189A5PLL7 270 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 NDUFB4O95168 129 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 ASCL3Q9NQ33 180 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 NOTCH4Q99466 2003 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 A0A0G2JMZ2 1700 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 LRRC37A2A6NM11 1700 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 MPZL1O95297 269 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 HOXB3P14651 431 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 RPL31P62899 125 aaKnown RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 HOXA4Q00056 320 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 SMAD4Q13485 552 aaKnown RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 OR11H4Q8NGC9 324 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 OSR1Q8TAX0 266 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM187Q14656 261 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF260Q3ZCT1 412 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 C10orf111Q8N326 155 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 SHANK3Q9BYB0 1731 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 IZUMO1RA6ND01 250 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 CDKN3Q16667 212 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 MRPS18BQ9Y676 258 aaKnown RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 SH2D7A6NKC9 451 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 H3BRM9 83 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 OR9G9P0C7N8 305 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 OR1B1Q8NGR6 318 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 OR4X1Q8NH49 305 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 HCFC1R1Q9NWW0 138 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 PLXNA4Q9HCM2 1894 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 GNG7O60262 68 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 MOSPD3O75425 235 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 CCL1P22362 96 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF362Q5T0B9 420 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-202ENST00000357162 OR10D3Q8NH80 312 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 PXMP4Q9Y6I8 212 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 KBTBD11-OT1A0A1B0GTJ5 212 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 CD160O95971 181 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM249Q2WGJ8 235 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 LINC01555Q8NAE3 123 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 YAE1D1Q9NRH1 226 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 TRGV5A0A0B4J1U4 118 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 PLNP26678 52 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 NUTF2P61970 127 aaKnown RBP5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SMIM14Q96QK8 99 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 ADAMTSL1Q8N6G6 1762 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 RFLNAQ6ZTI6 216 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SFTPA2Q8IWL1 248 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SFTPA1Q8IWL2 248 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 MRPL16Q9NX20 251 aaKnown RBP5.67□□□□□ -1.5
VPS13B-202ENST00000357162 UQCRFS1P47985 274 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 AMER3Q8N944 861 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 METTL26Q96S19 204 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 OLIG3Q7RTU3 272 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 ORMDL3Q8N138 153 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 LYG1Q8N1E2 194 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 STAB1Q9NY15 2570 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 INSL4Q14641 139 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 G6PC2Q9NQR9 355 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 ZFAND6Q6FIF0 208 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 MORN3Q6PF18 240 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-202ENST00000357162 C9orf40Q8IXQ3 194 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 TM4SF19Q96DZ7 209 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 JPT1Q9UK76 154 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 METTL12A8MUP2 240 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 MUC15Q8N387 334 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 AICDAQ9GZX7 198 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 NRSN2Q9GZP1 204 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 TWSG1Q9GZX9 223 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SRIP30626 198 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 NMUP48645 174 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 SSMEM1Q8WWF3 244 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 IL36BQ9NZH7 164 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 WNT16Q9UBV4 365 aa5.67□□□□□ -1.5
VPS13B-202ENST00000357162 CEACAM18A8MTB9 384 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 FNDC10F2Z333 226 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TTC9CQ8N5M4 171 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 A0A1W2PRS3 328 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 OR4C46A6NHA9 309 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 DNASE2O00115 360 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF750Q32MQ0 723 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 MBD3L1Q8WWY6 194 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 OR4C12Q96R67 309 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 A0A1W2PNR3 127 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 SS18L1O75177 396 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM78Q5T7P6 136 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LINC01545Q5VT33 79 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 SLC35E4Q6ICL7 350 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 THOC3Q96J01 351 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 MS4A5Q9H3V2 200 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 DHCR7Q9UBM7 475 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms