RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TBPP20226 339 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 F2RP25116 425 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 UCP3P55916 312 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 KHDC1LQ5JSQ8 128 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 C10orf99Q6UWK7 81 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 C19orf35Q6ZS72 473 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 SSX9Q7RTT3 188 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 DUSP18Q8NEJ0 188 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 DMBX1Q8NFW5 382 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 CASTOR1Q8WTX7 329 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 CHPT1Q8WUD6 406 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 JMJD8Q96S16 334 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 PRRT1Q99946 306 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 SEC22CQ9BRL7 303 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 GAB2Q9UQC2 676 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 NSG2Q9Y328 171 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 FBXO7Q9Y3I1 522 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 TBL2Q9Y4P3 447 aaKnown RBP3.2□□□□□ -1.9
LIG4-201ENST00000356922 A6NDX4 124 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 GPR31O00270 319 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 SHOXO15266 292 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 CNIH1O95406 144 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 IGKV1-5P01602 117 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 FAM157CP0CG43 387 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 AKR1C2P52895 323 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 ERVK-16P61578 105 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 GNB1P62873 340 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 EBI3Q14213 229 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 RTL8BQ17RB0 113 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 LPCAT3Q6P1A2 487 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 SPAG16Q8N0X2 631 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 CLCC1Q96S66 551 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 HSPB9Q9BQS6 159 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
LIG4-201ENST00000356922 CRYM-AS1A6NIL9 109 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 KRASP01116 189 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OPN1MWP04001 364 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CTSDP07339 412 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 APELAP0DMC3 54 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OPN1MW2P0DN77 364 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OPN1MW3P0DN78 364 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ATF4P18848 351 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 G6PCP35575 357 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 NDPQ00604 133 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 DHODHQ02127 395 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SRSF4Q08170 494 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 C10orf55Q5SWW7 151 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 KCTD9Q7L273 389 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 LYZL2Q7Z4W2 148 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 FAM71E2Q8N5Q1 922 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 Q8N9W7 124 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CCDC71LQ8N9Z2 235 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZFAND1Q8TCF1 268 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 FBXL15Q9H469 300 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZNF355PQ9NSJ1 428 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 PITPNC1Q9UKF7 332 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 TCF19Q9Y242 345 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 MGAM2Q2M2H8 2515 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 C3orf85A0A1B0GTC6 90 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CGB1A6NKQ9 187 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 RNF212BA8MTL3 300 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SLC25A17O43808 307 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ADAP1O75689 374 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CRYGBP07316 175 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OR4E1P0C645 316 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 EGR2P11161 476 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 ANXA3P12429 323 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 TMEM11P17152 192 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 HILS1P60008 231 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 DHRS2Q13268 280 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 TMEM187Q14656 261 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OXA1LQ15070 435 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 RBMS2Q15434 407 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 MMDQ15546 238 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 PLET1Q6UQ28 207 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SLC25A42Q86VD7 318 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SGPP2Q8IWX5 399 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 RRNAD1Q96FB5 475 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 MARVELD1Q9BSK0 173 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 FAM103A1Q9BTL3 118 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 PDCD10Q9BUL8 212 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SLC22A5O76082 557 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 IL6RP08887 468 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 OR9G9P0C7N8 305 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CD1BP29016 333 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 LPAR6P43657 344 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 LRRC75BQ2VPJ9 315 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 TMEM30BQ3MIR4 351 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 AKAP14Q86UN6 197 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 GRPEL2Q8TAA5 225 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 NOL4LQ96MY1 436 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 PHB2Q99623 299 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 RASL11BQ9BPW5 248 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 SLC35D1Q9NTN3 355 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 C9orf170A2RU37 121 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 TCF21O43680 179 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 GPR137BO60478 399 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 CDS2O95674 445 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 P0C879 139 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms