RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 LAMTOR2Q9Y2Q5 125 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 TCRBV5S2A0A599 114 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 TMPRSS3P57727 454 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 G6PC2Q9NQR9 355 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 PPIAL4EA0A075B759 164 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 PPIAL4FP0DN26 164 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 ERG28Q9UKR5 140 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 PPIAL4AQ9Y536 164 aa6.98□□□□□ -1.29
SCN8A-201ENST00000354534 PRB3Q04118 309 aaPredicted RBP6.97□□□□□ -1.29
SCN8A-201ENST00000354534 PNKDQ8N490 385 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 JPT2Q9H910 190 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 IL20Q9NYY1 176 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 hCG_38984A0A1B0GV85 526 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 RIMKLAQ8IXN7 391 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 JMJD8Q96S16 334 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 TNFSF18Q9UNG2 199 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 MYOFQ9NZM1 2061 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 ROS1P08922 2347 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 TRACP01848 142 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 REG1AP05451 166 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 CDIPTO14735 213 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 PATE4P0C8F1 98 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 GZMHP20718 246 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 DUX3Q96PT4 197 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 ITGB4P16144 1822 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 CD3EP07766 207 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF385AQ96PM9 386 aaKnown RBP6.97□□□□□ -1.29
SCN8A-201ENST00000354534 THAP10Q9P2Z0 257 aaPredicted RBP6.97□□□□□ -1.29
SCN8A-201ENST00000354534 SIRT4Q9Y6E7 314 aaPredicted RBP6.97□□□□□ -1.29
SCN8A-201ENST00000354534 LINC00158P58513 81 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 TMEM42Q69YG0 159 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 CCDC144NLQ6NUI1 221 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 IGLV3-10A0A075B6K4 115 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
SCN8A-201ENST00000354534 TSPAN7P41732 249 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF345Q14585 488 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 VN1R2Q8NFZ6 395 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 FGF14Q92915 247 aa6.97□□□□□ -1.29
SCN8A-201ENST00000354534 PRF1P14222 555 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 GABRG2P18507 467 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 MZB1Q8WU39 189 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 MRGPRX1Q96LB2 322 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 SELENOKQ9Y6D0 94 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 CD5LO43866 347 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 PF4P02776 101 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 CEACAM21Q3KPI0 293 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 TPTE2P1Q5T6R2 138 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 MIC13Q5XKP0 118 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 C2orf82Q6UX34 121 aa6.96□□□□□ -1.29
SCN8A-201ENST00000354534 IGHV3-72A0A0B4J1Y9 119 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 A6NNC1 897 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 ETHE1O95571 254 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 COL10A1Q03692 680 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 TGIF1Q15583 401 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 GP6Q9HCN6 339 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 R4GN57 208 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 TMEM258P61165 79 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 OR52E5Q8NH55 327 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 NPIPB4C9JG80 1138 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 K7N7A8 449 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 FAM53BQ14153 422 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 CENPWQ5EE01 88 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCN8A-201ENST00000354534 AGFG2O95081 481 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 CD33P20138 364 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 SH3BGRL3Q9H299 93 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 SHANK1Q9Y566 2161 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 PROB1E7EW31 1015 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 MRGPRX3Q96LB0 322 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 HEATR5AQ86XA9 2040 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 ZIC3O60481 467 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 C1QL1O75973 258 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 NBASA2RRP1 2371 aa6.96□□□□□ -1.3
SCN8A-201ENST00000354534 A0A0B4J2E0 115 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 A0A1B0GX12 115 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 PCSK4Q6UW60 755 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 IGHV3-66A0A0C4DH42 116 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 FAM106AQ4KMX7 169 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 MMD2Q8IY49 270 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 OR51G1Q8NGK1 321 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 LOXL4Q96JB6 756 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 LAMB2P55268 1798 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 CCL7P80098 99 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ZBTB34Q8NCN2 500 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 CRYGNQ8WXF5 182 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 RNASE4P34096 147 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 RPL27AP46776 148 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 RND2P52198 227 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF818PQ6ZRF7 136 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 CLDN14O95500 239 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 SEC11AP67812 179 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 POLR2AP24928 1970 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 A0A1W2PRS3 328 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 H3BMM0 161 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms