RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TTMPQ5BVD1 217 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CENPWQ5EE01 88 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 AKR1C8PQ5T2L2 129 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CYB5R2Q6BCY4 276 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PCP2Q8IVA1 136 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZBTB8OSQ8IWT0 167 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 MUC15Q8N387 334 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TNFAIP8L1Q8WVP5 186 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RNF133Q8WVZ7 376 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 DIRAS2Q96HU8 199 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CAMK2N2Q96S95 79 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ANAPC13Q9BS18 74 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR51V1Q9H2C8 321 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ASB8Q9H765 288 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NANOGQ9H9S0 305 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 C21orf62Q9NYP8 219 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TAS2R1Q9NYW7 299 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SSR3Q9UNL2 185 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 POMPQ9Y244 141 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ERGIC3Q9Y282 383 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 HSPB11Q9Y547 144 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 KIAA0232Q92628 1395 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PIK3C2BO00750 1634 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TRAV8-2A0A0B4J237 113 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 A0A1W2PP18 115 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 AHSA1O95433 338 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 HLA-AP01891 365 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV1-8P0DP01 117 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OGNP20774 298 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GADD45AP24522 165 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PSMA1P25786 263 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ERP29P30040 261 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SDC2P34741 201 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CBX5P45973 191 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OMPP47874 163 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TAS2R43P59537 309 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CDC42P60953 191 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NCALDP61601 193 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RANP62826 216 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 HPCAP84074 193 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 JOSD1Q15040 202 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TOMM34Q15785 309 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GRK1Q15835 563 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GOLGA7BQ2TAP0 167 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 FBXL19-AS1Q494R0 122 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PDZD11Q5EBL8 140 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 BRMS1LQ5PSV4 323 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF567Q8N184 647 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM35BQ8NCS4 154 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR4A5Q8NH83 315 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR1S1Q8NH92 325 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR1L1Q8NH94 360 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF431Q8TF32 576 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RBPMSQ93062 196 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 C12orf43Q96C57 262 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SMARCD1Q96GM5 515 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF382Q96SR6 550 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 VSIRQ9H7M9 311 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CXorf21Q9HAI6 301 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00846Q9NV44 126 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PKIGQ9Y2B9 76 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF780BQ9Y6R6 833 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PLXNB3Q9ULL4 1909 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CEP250Q9BV73 2442 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGKV3D-20A0A0C4DH25 116 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGKV1-12A0A0C4DH73 117 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 MYBPHLA2RUH7 354 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF705FA8MVS1 300 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM114B3SHH9 223 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ATP6V1G2-DDX39BF2Z307 99 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 UBDO15205 165 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SYNGR1O43759 233 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ARL6IP5O75915 188 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA17P01571 189 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGKV1D-12P01611 117 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA6P05013 189 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF705DP0CH99 300 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF705BP0CI00 300 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CD36P16671 472 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IMPA1P29218 277 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 AP2S1P53680 142 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 FMODQ06828 376 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IRF4Q15306 451 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SSX1Q16384 188 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SLC36A2Q495M3 483 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 DNM1P34Q6PK57 102 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM15Q7Z3B0 74 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ATP5L2Q7Z4Y8 100 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ARPINQ7Z6K5 226 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NAA40Q86UY6 237 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CALHM1Q8IU99 346 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR2M3Q8NG83 312 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TERB2Q8NHR7 220 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SYNPRQ8TBG9 265 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PHYHIPLQ96FC7 376 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GPR82Q96P67 336 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 OR2M4Q96R27 311 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SLC22A4Q9H015 551 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 CST11Q9H112 138 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 LRRC19Q9H756 370 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms