RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TRGV10A0A0A0MS01 117 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 TRAV38-1A0A0B4J264 116 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 KBTBD11-OT1A0A1B0GTJ5 212 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 FAM24AA6NFZ4 105 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 ZNF729A6NN14 1252 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 FAM90A9PA6NNJ1 464 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 LGALS8O00214 317 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 TOR1AO14656 332 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 RAB29O14966 203 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 FSTL3O95633 263 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 LY86O95711 162 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 TMEM50AO95807 157 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 CYB5R3P00387 301 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 AVPP01185 164 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 EPHA1P21709 976 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 KIR2DS2P43631 304 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 LPAR6P43657 344 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 DVL1P1P54792 670 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 PAX9P55771 341 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 RPL23AP62750 156 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 MEF2CQ06413 473 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 MST1LQ2TV78 715 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 Q3ZCU0 254 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 AARDQ4LEZ3 155 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 MORN2Q502X0 79 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 ODF3L1Q8IXM7 274 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 COMMD1Q8N668 190 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 TPRX1Q8N7U7 411 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 BOLLQ8N9W6 283 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 ZNRF1Q8ND25 227 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 OR10A7Q8NGE5 316 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 RNASE11Q8TAA1 199 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 BSCL2Q96G97 398 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 TSNAXQ99598 290 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 PIMREGQ9BSJ6 248 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 PARD6GQ9BYG4 376 aaPredicted RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 IFI27L2Q9H2X8 130 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 SAP30LQ9HAJ7 183 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 GAR1Q9NY12 217 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 TAS2R3Q9NYW6 316 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 CLN8Q9UBY8 286 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 CACNG5Q9UF02 275 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 STRAPQ9Y3F4 350 aaKnown RBP6.71□□□□□ -1.34
CD44-205ENST00000352818 DNAH7Q8WXX0 4024 aa6.71□□□□□ -1.34
CD44-205ENST00000352818 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
CD44-205ENST00000352818 B9A039 149 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 G3V4G9 280 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 TMEM178BH3BS89 294 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 NDUFS8O00217 210 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 TXNL1O43396 289 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 SYNGR2O43760 224 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 CHST1O43916 411 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 MED6O75586 246 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 DFFBO76075 338 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
CD44-205ENST00000352818 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
CD44-205ENST00000352818 DUTP33316 252 aaKnown RBP6.7□□□□□ -1.34
CD44-205ENST00000352818 GPR12P47775 334 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 SULT1A1P50225 295 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 PDLIM4P50479 330 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 CAV2P51636 162 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 F2RL1P55085 397 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 EDDM3BP56851 147 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 BRWD1-AS2P59051 145 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 RPL30P62888 115 aaKnown RBP6.7□□□□□ -1.34
CD44-205ENST00000352818 PJVKQ0ZLH3 352 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 C17orf58Q2M2W7 97 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 PXDC1Q5TGL8 231 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 BTNL8Q6UX41 500 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 Q6ZRM9 215 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 TCF23Q7RTU1 214 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 STX12Q86Y82 276 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 FGFRL1Q8N441 504 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 TCTEX1D2Q8WW35 142 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 LINC00052Q96N35 136 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 DCTN5Q9BTE1 182 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 SMIM3Q9BZL3 60 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 HIPK2Q9H2X6 1198 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 MS4A5Q9H3V2 200 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 GNG12Q9UBI6 72 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 HSPB7Q9UBY9 170 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 CACFD1Q9UGQ2 172 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 PSG11Q9UQ72 335 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 LINC00312Q9Y6C7 94 aa6.7□□□□□ -1.34
CD44-205ENST00000352818 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 hADV38S2A0JD32 116 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 C17orf98A8MV24 154 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 UMAD1C9J7I0 102 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 TNFRSF13BO14836 293 aaPredicted RBP6.69□□□□□ -1.34
CD44-205ENST00000352818 ST8SIA5O15466 376 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 S1PR2O95136 353 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 HPRT1P00492 218 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 OR8U8P0C7N1 319 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 M6PRP20645 277 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 MDKP21741 143 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms