RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 Q6ZS49 121 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.11□□□□□ -0.63
IFT88-202ENST00000351808 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
IFT88-202ENST00000351808 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 YTHDF2Q9Y5A9 579 aaKnown RBP11.11□□□□□ -0.63
IFT88-202ENST00000351808 HLA-DQA1P01909 254 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 COL8A2P25067 703 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 GDF1P27539 372 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 PTGDSP41222 190 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 SLC37A2Q8TED4 501 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 KIR2DS1A0A191URI9 304 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 AMY1AP04745 511 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 KIR2DS4P43632 304 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 FOXE3Q13461 319 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 KIR2DS1Q14954 304 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 KIAA0895LQ68EN5 471 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 DOLPP1Q86YN1 238 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 ZNF611Q8N823 705 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 CT55Q8WUE5 264 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 PIGCQ92535 297 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 WDR54Q9H977 334 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 MRPL43Q8N983 215 aaKnown RBP11.1□□□□□ -0.63
IFT88-202ENST00000351808 OR5A2Q8NGI9 324 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 OR4A5Q8NH83 315 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 ULBP2Q9BZM5 246 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 THYN1Q9P016 225 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 IL36RNQ9UBH0 155 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 CEACAM3P40198 252 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 RAB9AP51151 201 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 C20orf204Q6ZNR8 217 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 FGFRL1Q8N441 504 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 Q8N7P7 452 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 SPTSSAQ969W0 71 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
IFT88-202ENST00000351808 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 SH2D7A6NKC9 451 aaPredicted RBP11.09□□□□□ -0.63
IFT88-202ENST00000351808 UQCRFS1P47985 274 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 PLP1P60201 277 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 SPINK9Q5DT21 86 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 TSTD1Q8NFU3 115 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 AP1S3Q96PC3 154 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 PLSCR4Q9NRQ2 329 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 PIGBOS1A0A0B4J2F0 54 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 ZG16O60844 167 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 CELA2BP08218 269 aaPredicted RBP11.09□□□□□ -0.63
IFT88-202ENST00000351808 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
IFT88-202ENST00000351808 USF1P22415 310 aaPredicted RBP11.09□□□□□ -0.63
IFT88-202ENST00000351808 CRYBB3P26998 211 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 DEFB103AP81534 67 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 ZNF542PQ5EBM4 170 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 SIGMAR1Q99720 223 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 TNFRSF19Q9NS68 423 aa11.09□□□□□ -0.63
IFT88-202ENST00000351808 SNAI2O43623 268 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 IGLV2-14P01704 120 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 RAB1CQ92928 201 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 TMEM45BQ96B21 275 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 H3BUT2 72 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 SCGB1A1P11684 91 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 BCL3P20749 454 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 CRYBA4P53673 196 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 RPL8P62917 257 aaKnown RBP11.08□□□□□ -0.64
IFT88-202ENST00000351808 C17orf67Q0P5P2 114 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 TMEM249Q2WGJ8 235 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 COX19Q49B96 90 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 RNFT1Q5M7Z0 435 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 OXGR1Q96P68 337 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 OR1A1Q9P1Q5 309 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 SPEGQ15772 3267 aa11.08□□□□□ -0.64
IFT88-202ENST00000351808 GPR183P32249 361 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 HIST1H1AQ02539 215 aaPredicted RBP11.07□□□□□ -0.64
IFT88-202ENST00000351808 ZNF718Q3SXZ3 478 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
IFT88-202ENST00000351808 COPS7AQ9UBW8 275 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 KCNS2Q9ULS6 477 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 FAM90A26D6RGX4 464 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 TLX3O43711 291 aaPredicted RBP11.07□□□□□ -0.64
IFT88-202ENST00000351808 FOXL2P58012 376 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms