RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 PCNX2A6NKB5 2137 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 OR5I1Q13606 314 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 TMEM37Q8WXS4 190 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 DLL1O00548 723 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 USF1P22415 310 aaPredicted RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 HTR1DP28221 377 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 CLEC2AQ6UVW9 174 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 DTX1Q86Y01 620 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 C18orf12Q96KH6 178 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 SLC25A15Q9Y619 301 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 MBD3L4A6NDZ8 208 aaPredicted RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 MBD3L3A6NE82 208 aaPredicted RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 MBD3L5A6NJ08 208 aaPredicted RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 MBD3L2Q8NHZ7 208 aaPredicted RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 CLEC7AQ9BXN2 247 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 B4DEV8 164 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 RNASE6Q93091 150 aaKnown RBP16.29■□□□□ 0.2
RNF38-202ENST00000350199 TRAPPC1Q9Y5R8 145 aa16.29■□□□□ 0.2
RNF38-202ENST00000350199 LIPFP07098 398 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 CFPP27918 469 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 FAM216AQ8WUB2 273 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 PERPQ96FX8 193 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 COL4A3Q01955 1670 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 SPINK4O60575 86 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 FAM157CP0CG43 387 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 MBNL2Q5VZF2 373 aaKnown RBP16.28■□□□□ 0.2
RNF38-202ENST00000350199 MIC13Q5XKP0 118 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 COL6A6A6NMZ7 2263 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 PUSL1Q8N0Z8 303 aaKnown RBP16.28■□□□□ 0.2
RNF38-202ENST00000350199 PAX5Q02548 391 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 FAM74A3Q4VXF1 159 aa16.28■□□□□ 0.2
RNF38-202ENST00000350199 LOC105371242A0A075B767 164 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.27■□□□□ 0.2
RNF38-202ENST00000350199 H0YIZ8 118 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 CLN5O75503 358 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 ZNF581Q9P0T4 197 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 TECTAO75443 2155 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 S100A8P05109 93 aa16.27■□□□□ 0.2
RNF38-202ENST00000350199 SNRPEP62304 92 aaKnown RBP16.27■□□□□ 0.19
RNF38-202ENST00000350199 ZNF146Q15072 292 aa16.27■□□□□ 0.19
RNF38-202ENST00000350199 PRO3102Q9H379 93 aa16.27■□□□□ 0.19
RNF38-202ENST00000350199 EIF3GO75821 320 aaKnown RBP eCLIP16.27■□□□□ 0.19
RNF38-202ENST00000350199 ECSCRQ19T08 205 aa16.27■□□□□ 0.19
RNF38-202ENST00000350199 ZNF324BQ6AW86 544 aaPredicted RBP16.27■□□□□ 0.19
RNF38-202ENST00000350199 PNKDQ8N490 385 aa16.27■□□□□ 0.19
RNF38-202ENST00000350199 TOLLIPQ9H0E2 274 aa16.27■□□□□ 0.19
RNF38-202ENST00000350199 POLEQ07864 2286 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 BATFQ16520 125 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 MYO7BQ6PIF6 2116 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 Q8WTZ3 238 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 DOCK7Q96N67 2140 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 TMEM204Q9BSN7 226 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 TNFRSF19Q9NS68 423 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 SERTM2A0A1B0GWG4 89 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 DBX1A6NMT0 343 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 TLNRD1Q9H1K6 362 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 C20orf202A1L168 122 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 NTF3P20783 257 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 IGHV1-46P01743 117 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 SUPT4H1P63272 117 aaKnown RBP16.26■□□□□ 0.19
RNF38-202ENST00000350199 MEF2CQ06413 473 aaPredicted RBP16.26■□□□□ 0.19
RNF38-202ENST00000350199 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.26■□□□□ 0.19
RNF38-202ENST00000350199 LINC00312Q9Y6C7 94 aa16.26■□□□□ 0.19
RNF38-202ENST00000350199 GATCO43716 136 aaKnown RBP16.25■□□□□ 0.19
RNF38-202ENST00000350199 PIP4P1Q86T03 277 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 STXBP6Q8NFX7 210 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 OR10G8Q8NGN5 311 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 ANAPC16Q96DE5 110 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 HSPB1P04792 205 aaKnown RBP16.25■□□□□ 0.19
RNF38-202ENST00000350199 NTF4P34130 210 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 AURKAIP1Q9NWT8 199 aaPredicted RBP16.25■□□□□ 0.19
RNF38-202ENST00000350199 GAR1Q9NY12 217 aaKnown RBP16.25■□□□□ 0.19
RNF38-202ENST00000350199 M0QZ24 198 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 NAPSAO96009 420 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 MEF2BQ02080 365 aaPredicted RBP16.25■□□□□ 0.19
RNF38-202ENST00000350199 OR2T10Q8NGZ9 312 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 RAB24Q969Q5 203 aa16.25■□□□□ 0.19
RNF38-202ENST00000350199 LINC00869P0C866 280 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 SRSF7Q16629 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
RNF38-202ENST00000350199 AP1S3Q96PC3 154 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 RARRES2Q99969 163 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 SRRM5B3KS81 715 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 TMEM18Q96B42 140 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 HELTA6NFD8 242 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 PSPNO60542 156 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 RPEL1Q2QD12 228 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 WDR61Q9GZS3 305 aaKnown RBP16.24■□□□□ 0.19
RNF38-202ENST00000350199 NAT8BQ9UHF3 227 aa16.24■□□□□ 0.19
RNF38-202ENST00000350199 H0Y8G0 127 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 YPEL1O60688 119 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 COLCA1Q6ZS62 124 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 YPEL2Q96QA6 119 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 CCL3L1P16619 93 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 LY6DQ14210 128 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 FAM106CPP0CH98 169 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 RAB5AP20339 215 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 RND2P52198 227 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 RNF138Q8WVD3 245 aa16.23■□□□□ 0.19
RNF38-202ENST00000350199 FAM103A1Q9BTL3 118 aaKnown RBP16.23■□□□□ 0.19
RNF38-202ENST00000350199 CORTO00230 105 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms