RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ZNF2Q9BSG1 426 aaPredicted RBP5.03□□□□□ -1.6
RFC1-201ENST00000349703 PARP12Q9H0J9 701 aaKnown RBP5.03□□□□□ -1.6
RFC1-201ENST00000349703 SDF2L1Q9HCN8 221 aa5.03□□□□□ -1.6
RFC1-201ENST00000349703 PRTFDC1Q9NRG1 225 aa5.03□□□□□ -1.6
RFC1-201ENST00000349703 NXT1Q9UKK6 140 aaKnown RBP5.03□□□□□ -1.6
RFC1-201ENST00000349703 TRAV36DV7A0A075B6V5 113 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 A0A087WUJ7 227 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TLCD2A6NGC4 264 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 MARCH11A6NNE9 402 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 SNAI2O43623 268 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 DNAL4O96015 105 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 HPNP05981 417 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TMEM183BQ1AE95 376 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ANKRD55Q3KP44 614 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ZNF707Q96C28 371 aaPredicted RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 EGLN1Q9GZT9 426 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 SLC7A11Q9UPY5 501 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 CSDC2Q9Y534 153 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 GNB3P16520 340 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ZNF136P52737 540 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 RPS11P62280 158 aaKnown RBP eCLIP5.02□□□□□ -1.61
RFC1-201ENST00000349703 ICAM4Q14773 271 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TMEM52BQ4KMG9 183 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 VAX1Q5SQQ9 334 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 GLIPR1L1Q6UWM5 242 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 CLEC19AQ6UXS0 136 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 OR51A4Q8NGJ6 313 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 OR10G7Q8NGN6 311 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TP53RKQ96S44 253 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ARV1Q9H2C2 271 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 KLK13Q9UKR3 277 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 PATJQ8NI35 1801 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TRBV6-7A0A0A0MS04 114 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TRAV25A0A0B4J276 109 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 A0A1W2PN81 502 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 IGHV4-30-4P0DP06 118 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 CHRNA7P36544 502 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ZP4Q12836 540 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TMEM176BQ3YBM2 270 aaPredicted RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 TRPT1Q86TN4 253 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 SLC26A10Q8NG04 563 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 GPR119Q8TDV5 335 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 C14orf144Q96I85 54 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 CST9LQ9H4G1 147 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 THYN1Q9P016 225 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 PILRBQ9UKJ0 227 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ZNF646O15015 1829 aaPredicted RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 IGHV2-70DA0A0C4DH43 119 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 HSPB1P04792 205 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 HOXC4P09017 264 aaPredicted RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 DANCRP0C864 163 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 NANOS3P60323 173 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 ADIRFQ15847 76 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TRMT12Q53H54 448 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 C5orf24Q7Z6I8 188 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 OR10AD1Q8NGE0 317 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 CALYQ9NYX4 217 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 PEF1Q9UBV8 284 aaKnown RBP5.02□□□□□ -1.61
RFC1-201ENST00000349703 PKIGQ9Y2B9 76 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 TRAPPC1Q9Y5R8 145 aa5.02□□□□□ -1.61
RFC1-201ENST00000349703 ZNF638Q14966 1978 aaKnown RBP5.01□□□□□ -1.61
RFC1-201ENST00000349703 NUP214P35658 2090 aaPredicted RBP5.01□□□□□ -1.61
RFC1-201ENST00000349703 ZNF860A6NHJ4 632 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 HAND1O96004 215 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 IGHV2-5P01817 119 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 ELANEP08246 267 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 TPPP2P59282 170 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 CKS1BP61024 79 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 ZNF117Q03924 483 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 REEP6Q96HR9 211 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 ABHD14BQ96IU4 210 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 RITA1Q96K30 269 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 SAMD10Q9BYL1 202 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 CSTL1Q9H114 145 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 PPDPFQ9H3Y8 114 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 PLEKHF2Q9H8W4 249 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 SIGLEC8Q9NYZ4 499 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 FAM90A8PA6NJQ4 464 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 TRAPPC2LH3BP13 241 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 CCL16O15467 120 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 IFI6P09912 130 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 FAM90A13PP0C7W8 464 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 FAM90A24PP0C7X0 464 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 HGFACQ04756 655 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 PCK2Q16822 640 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 MPV17L2Q567V2 206 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 FAM231DQ6ZW35 169 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 TMEM25Q86YD3 366 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 TMEM183AQ8IXX5 376 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 AQP3Q92482 292 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 FRZBQ92765 325 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 GPX7Q96SL4 187 aaPredicted RBP5.01□□□□□ -1.61
RFC1-201ENST00000349703 LRRC61Q9BV99 259 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 TRAPPC2LQ9UL33 140 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 ZNF727A8MUV8 499 aa5.01□□□□□ -1.61
RFC1-201ENST00000349703 OR7C1O76099 320 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms