RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 LYG1Q8N1E2 194 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.58□□□□□ -0.56
TRIM4-201ENST00000349062 SLC31A2O15432 143 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 ZG16O60844 167 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 IGLV1-44P01699 117 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 OR4A8P0C604 315 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 REG1BP48304 166 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF266Q14584 549 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 LINC01560Q8TB33 94 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 DCHS2Q6V1P9 2916 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 CASP6P55212 293 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 MISP3Q96FF7 219 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 PRDM13Q9H4Q3 707 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 HIST1H1BP16401 226 aaKnown RBP11.57□□□□□ -0.56
TRIM4-201ENST00000349062 GLRXP35754 106 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 PAX9P55771 341 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 ID3Q02535 119 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 TBR1Q16650 682 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 SDSLQ96GA7 329 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 CABLES2Q9BTV7 478 aa11.57□□□□□ -0.56
TRIM4-201ENST00000349062 GFRA3O60609 400 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 KITLGP21583 273 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 CATR1Q13166 79 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 DYNLRB1Q9NP97 96 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 CENPEQ02224 2701 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 SRP19P09132 144 aaKnown RBP11.56□□□□□ -0.56
TRIM4-201ENST00000349062 CCKARP32238 428 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 CD200P41217 278 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 HCFC1P51610 2035 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 ADIRFQ15847 76 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 TMEM108Q6UXF1 575 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 FAM90A1Q86YD7 464 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 TGIF2LXQ8IUE1 241 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 K7N7A8 449 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 IFNA10P01566 189 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 IGFL3Q6UXB1 125 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 Q6ZS49 121 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 Q8NA96 180 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 RBKSQ9H477 322 aa11.56□□□□□ -0.56
TRIM4-201ENST00000349062 MBNL3Q9NUK0 354 aaKnown RBP11.56□□□□□ -0.56
TRIM4-201ENST00000349062 DPRXA6NFQ7 191 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 MYOD1P15172 320 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 GCM1Q9NP62 436 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 DYSFO75923 2080 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 CSMD1Q96PZ7 3565 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF134P52741 427 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 SLC35E4Q6ICL7 350 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF665Q9H7R5 613 aa11.55□□□□□ -0.56
TRIM4-201ENST00000349062 J3QW42 95 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
TRIM4-201ENST00000349062 SSTP61278 116 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 C1orf87Q8N0U7 546 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 MMP23AO75900 390 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 TNFSF4P23510 183 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 BAXQ07812 192 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 KRTCAP3Q53RY4 240 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
TRIM4-201ENST00000349062 PPP1R35Q8TAP8 253 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 OR4C12Q96R67 309 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 SFXN3Q9BWM7 321 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 RNF7Q9UBF6 113 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 TRAV3A0A0B4J244 114 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 A0A1B0GU03 582 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 LY6HO94772 140 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 ICAM4Q14773 271 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 ZNF124Q15973 351 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 MALSU1Q96EH3 234 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 FAM208BQ5VWN6 2430 aa11.54□□□□□ -0.56
TRIM4-201ENST00000349062 CCL3L1P16619 93 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 COL8A2P25067 703 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 RPUSD4Q96CM3 377 aaKnown RBP11.53□□□□□ -0.56
TRIM4-201ENST00000349062 R3HDM4Q96D70 268 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
TRIM4-201ENST00000349062 LAMP3Q9UQV4 416 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 RNF115Q9Y4L5 304 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 RNF212BA8MTL3 300 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 ATP5SQ99766 215 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
TRIM4-201ENST00000349062 HES4Q9HCC6 221 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 TRBV6-6A0A0A6YYG2 114 aa11.53□□□□□ -0.56
TRIM4-201ENST00000349062 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms