RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 RAB2BQ8WUD1 216 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 SNAPC3Q92966 411 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 NAA50Q9GZZ1 169 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 KLK15Q9H2R5 256 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 TPSG1Q9NRR2 321 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 RGS5O15539 181 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 TRGV3P03979 118 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 ELK1P19419 428 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 RUNX1Q01196 453 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 DYRK1AQ13627 763 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 PRSS8Q16651 343 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 DEFB136Q30KP8 78 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 LPCAT3Q6P1A2 487 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 CLVS1Q8IUQ0 354 aaPredicted RBP12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 CMTM1Q8IZ96 169 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 MYOZ3Q8TDC0 251 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 CD300LFQ8TDQ1 290 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 OR5B12Q96R08 314 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 ZNF2Q9BSG1 426 aaPredicted RBP12.29□□□□□ -0.44
TSPAN4-201ENST00000346501 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 ARPC1BO15143 372 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 TNFSF12O43508 249 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 OR2A4O95047 310 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 PMP2P02689 132 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 CRYGBP07316 175 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 SAA1P0DJI8 122 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 EGR2P11161 476 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 NAT1P18440 290 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 RCVRNP35243 200 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 RFX2P48378 723 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 RPL30P62888 115 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 C19orf54Q5BKX5 351 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 IDO2Q6ZQW0 420 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 OR2A7Q96R45 310 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 COA4Q9NYJ1 87 aa12.28□□□□□ -0.44
TSPAN4-201ENST00000346501 MSGN1A6NI15 193 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■■■□ 21.7
TSPAN4-201ENST00000346501 TPPPO94811 219 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 IFNA6P05013 189 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 TMBIM6P55061 237 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 SLC25A42Q86VD7 318 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 OR5T1Q8NG75 326 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 GPX8Q8TED1 209 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 SRSF12Q8WXF0 261 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 RHOVQ96L33 236 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 EXTL2Q9UBQ6 330 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.45
TSPAN4-201ENST00000346501 MEGF8Q7Z7M0 2845 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 DPPA5A6NC42 116 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 LINC01619G3V211 115 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 I3L521 148 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 SOX15O60248 233 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 IGLV2-14P01704 120 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 LGALS1P09382 135 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 HRH1P35367 487 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 MAS1LP35410 378 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 OR51H1Q8NH63 302 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 MOB3AQ96BX8 217 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 SCOCQ9UIL1 159 aa12.26□□□□□ -0.45
TSPAN4-201ENST00000346501 SEC14L6B5MCN3 397 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 KBTBD11O94819 623 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 HPRT1P00492 218 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 ERVK-16P61578 105 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 FHL3Q13643 280 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 ZNF818PQ6ZRF7 136 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 FCAMRQ8WWV6 532 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 HRASLSQ9HDD0 168 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 RABL2AQ9UBK7 228 aaPredicted RBP12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 RABL2BQ9UNT1 228 aa12.25□□□□□ -0.45
TSPAN4-201ENST00000346501 GPR31O00270 319 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 RAMP3O60896 148 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 DHFRP00374 187 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 IGHV3-11P01762 117 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 HSPB1P04792 205 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 NQO2P16083 231 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 397.7 ms