RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZNF767PQ75MW2 155 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 SLC51BQ86UW2 128 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF565Q8N9K5 539 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF596Q8TC21 504 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 PPP1R1CQ8WVI7 109 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 GPR31O00270 319 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 TIMM23O14925 209 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 RPA2P15927 270 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 C10orf99Q6UWK7 81 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 CCDC28AQ8IWP9 274 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 OR4C13Q8NGP0 309 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 SLC5A7Q9GZV3 580 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 OR2W1Q9Y3N9 320 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 IGKV1D-13A0A0B4J2D9 117 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 FAM90A9PA6NNJ1 464 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 LEUTXA8MZ59 168 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 TSC22D2O75157 780 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 IGKV1-13P0DP09 117 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 REG1BP48304 166 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 OPCMLQ14982 345 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 LIAT1Q6ZQX7 453 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 OR10V1Q8NGI7 309 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 WNT10AQ9GZT5 417 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
RAB5C-201ENST00000346213 SHOXO15266 292 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 MPPED1O15442 326 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 ARPC5O15511 151 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 KCNAB3O43448 404 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 HBZP02008 142 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 HOXB5P09067 269 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 OR5AC1P0C628 307 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 CD28P10747 220 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 PSMB6P28072 239 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 AP2S1P53680 142 aaPredicted RBP12.79□□□□□ -0.36
RAB5C-201ENST00000346213 IL15RAQ13261 267 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 ST6GALNAC6Q969X2 333 aa12.79□□□□□ -0.36
RAB5C-201ENST00000346213 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
RAB5C-201ENST00000346213 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 TOR1AO14656 332 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 MPC2O95563 127 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 IFNA21P01568 189 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 SNRNP70P08621 437 aaKnown RBP12.78□□□□□ -0.36
RAB5C-201ENST00000346213 S100A11P31949 105 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF818PQ6ZRF7 136 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF546Q86UE3 836 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 GLYATL2Q8WU03 294 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 OR10C1Q96KK4 312 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
RAB5C-201ENST00000346213 CCL28Q9NRJ3 127 aa12.78□□□□□ -0.36
RAB5C-201ENST00000346213 TMA7Q9Y2S6 64 aaKnown RBP12.78□□□□□ -0.36
RAB5C-201ENST00000346213 C3orf85A0A1B0GTC6 90 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 MPTX1A8MV57 137 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 SP6Q3SY56 376 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TEX261Q6UWH6 196 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TMUB2Q71RG4 321 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 LGI3Q8N145 548 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 PRR18Q8N4B5 295 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 OR52L2PQ8NGH6 319 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 SLC25A33Q9BSK2 321 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 MFFQ9GZY8 342 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 RDH8Q9NYR8 311 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 OR1A1Q9P1Q5 309 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 TNFSF18Q9UNG2 199 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 U3KQ87 197 aa12.77□□□□□ -0.36
RAB5C-201ENST00000346213 NOTCH1P46531 2555 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 A0A0D9SG52 128 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-201ENST00000346213 SRPXP78539 464 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 LRRC37A5PQ49AS3 106 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 CMTM1Q8IZ96 169 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 BVESQ8NE79 360 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 OR10A7Q8NGE5 316 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms