RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 C5orf17Q8NAS9 161 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZDHHC16Q969W1 377 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 NABP2Q9BQ15 211 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 MRPS11P82912 194 aaKnown RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 FLVCR1-AS1Q8TAF5 88 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 FAM216AQ8WUB2 273 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SPSB2Q99619 263 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 HSPB7Q9UBY9 170 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 COL4A4P53420 1690 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 K7ESF4 209 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF324O75467 553 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SERF1AO75920 110 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RBP4P02753 201 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 MEOX1P50221 254 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TCTAP57738 103 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ACSF3Q4G176 576 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 PSMG4Q5JS54 123 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SLC25A33Q9BSK2 321 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TBR1Q16650 682 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RASL11AQ6T310 242 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 HARBI1Q96MB7 349 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 hCG_38984A0A1B0GV85 526 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TWIST1Q15672 202 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF664Q8N3J9 261 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RTN4RQ9BZR6 473 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TCFL5Q9UL49 500 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 IGKV1-9A0A0C4DH69 117 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 LYZL6O75951 148 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 DOLPP1Q86YN1 238 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 OR8B3Q8NGG8 313 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 CENPFP49454 3210 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 SCGB1C2P0DMR2 95 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 EPHA8P29322 1005 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 LGALS4P56470 323 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 GAGE1Q13065 139 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 DEFB108BQ8NET1 73 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 IGKV3D-11A0A0A0MRZ8 115 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 TRAV39A0A0B4J263 110 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 A0A1B0GV72 72 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 FAM90A9PA6NNJ1 464 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CTSBP07858 339 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MAGEA5P43359 124 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 FHL1Q13642 323 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 RAB1CQ92928 201 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 GUCD1Q96NT3 240 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 C21orf140B9A014 251 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 EFEMP2O95967 443 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ORM1P02763 201 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MMDQ15546 238 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CALHM1Q8IU99 346 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 SLC25A40Q8TBP6 338 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 C1QTNF5Q9BXJ0 243 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 WNT10AQ9GZT5 417 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 SNRNP200O75643 2136 aaKnown RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 SCO2A0A1W2PP80 73 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 NCBP2LA6PVI3 153 aaKnown RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 PRDX2P32119 198 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MAS1LP35410 378 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 RND2P52198 227 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 DHRS13Q6UX07 377 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM108Q6UXF1 575 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 OR51G1Q8NGK1 321 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ORAOV1Q8WV07 137 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 SFXN3Q9BWM7 321 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 RALYQ9UKM9 306 aaKnown RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 GNB2P62879 340 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MST1LQ2TV78 715 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 OR1L8Q8NGR8 309 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 WFDC1Q9HC57 220 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 UMODP07911 640 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 COMPP49747 757 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 TNFAIP6P98066 277 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 RBPJQ06330 500 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 STPG3Q8N7X2 389 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 FMC1Q96HJ9 113 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF488Q96MN9 340 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 JPT1Q9UK76 154 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ODAMA1E959 279 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CSN3P07498 182 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 WNT5AP41221 380 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CCL20P78556 96 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 FBLN7Q53RD9 439 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 GATAD1Q8WUU5 269 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CDX2Q99626 313 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 WNT5BQ9H1J7 359 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 MYF5P13349 255 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 FXYD3Q14802 87 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 IZUMO4Q1ZYL8 232 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 TIMP3P35625 211 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 HSPE1P61604 102 aaKnown RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CHCHD2Q9Y6H1 151 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-203ENST00000343508 CEACAM3P40198 252 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 STPG1Q5TH74 334 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM140Q9NV12 185 aa4.07□□□□□ -1.76
CSMD3-203ENST00000343508 ATP5G3P48201 142 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 RPL8P62917 257 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 ALKBH6Q3KRA9 238 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms