RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 EIF3GO75821 320 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMAD4-201ENST00000342988 MPZL1O95297 269 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 GPR6P46095 362 aaPredicted RBP15.32■□□□□ 0.04
SMAD4-201ENST00000342988 EFNB2P52799 333 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CCSMST1Q4G0I0 132 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 C12orf73Q69YU5 71 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 ALS2Q96Q42 1657 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 CA7P43166 264 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 TIMM23BQ5SRD1 257 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 MS4A3Q96HJ5 214 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 FMC1Q96HJ9 113 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 KCNS1Q96KK3 526 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 ATOH7Q8N100 152 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 SEMA5BQ9P283 1151 aa15.32■□□□□ 0.04
SMAD4-201ENST00000342988 V9GYH0 126 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 CENPVQ7Z7K6 275 aaPredicted RBP15.31■□□□□ 0.04
SMAD4-201ENST00000342988 FGF22Q9HCT0 170 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 LAMTOR3Q9UHA4 124 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 DUTP33316 252 aaKnown RBP15.31■□□□□ 0.04
SMAD4-201ENST00000342988 MARS2Q96GW9 593 aaKnown RBP15.31■□□□□ 0.04
SMAD4-201ENST00000342988 CTSVO60911 334 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 P2RY4P51582 365 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 TMEM74BQ9NUR3 256 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 RPL36A-HNRNPH2H7BZ11 118 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 NPCDR1Q9BY65 106 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 HILPDAQ9Y5L2 63 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 FAM90A26D6RGX4 464 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 C16orf97H3BN30 126 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 PEX7O00628 323 aa15.31■□□□□ 0.04
SMAD4-201ENST00000342988 GCSAMQ8N6F7 178 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 CHST5Q9GZS9 411 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 SLC25A37Q9NYZ2 338 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 TCRBV5S2A0A599 114 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 SLC25A53Q5H9E4 307 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 OR4X2Q8NGF9 303 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 GPX4P36969 197 aaPredicted RBP15.3■□□□□ 0.04
SMAD4-201ENST00000342988 KIAA1644Q3SXP7 199 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 LINC01549A6NIU2 74 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 CD300LDQ6UXZ3 194 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 HIST1H2BAQ96A08 127 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 ST6GAL2Q96JF0 529 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 MRPL52Q86TS9 123 aaKnown RBP15.3■□□□□ 0.04
SMAD4-201ENST00000342988 CD8AP01732 235 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 COL10A1Q03692 680 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 OR10J3Q5JRS4 329 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 MARVELD3Q96A59 401 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 GGACTQ9BVM4 153 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 QSER1Q2KHR3 1735 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 HOXD4P09016 255 aaPredicted RBP15.3■□□□□ 0.04
SMAD4-201ENST00000342988 PCSK4Q6UW60 755 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 ORMDL3Q8N138 153 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 PLA2G3Q9NZ20 509 aa15.3■□□□□ 0.04
SMAD4-201ENST00000342988 LYZL2Q7Z4W2 148 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 A0A1B0GUT8 65 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 C9orf62Q8N4C0 152 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 PPIAL4EA0A075B759 164 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 A0A0G2JLM5 398 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 PPIAL4FP0DN26 164 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 ZNF585BQ52M93 769 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 PPIAL4AQ9Y536 164 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 C8orf88P0DMB2 117 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 GLIPR1P48060 266 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 C18orf15Q96N68 181 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 CCL28Q9NRJ3 127 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 SBF2Q86WG5 1849 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 TRGV2A0A075B6R0 118 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 LINC01559Q495D7 138 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 H0Y8X5 98 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 SELENOHQ8IZQ5 122 aaKnown RBP15.29■□□□□ 0.04
SMAD4-201ENST00000342988 KLF12Q9Y4X4 402 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 J3QT63 122 aa15.29■□□□□ 0.04
SMAD4-201ENST00000342988 UNQ5815/PRO19632Q6UWF5 114 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 ADAD2Q8NCV1 583 aaKnown RBP15.28■□□□□ 0.04
SMAD4-201ENST00000342988 SPANXCQ9NY87 97 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 MRPL24Q96A35 216 aaKnown RBP15.28■□□□□ 0.04
SMAD4-201ENST00000342988 SPEM1Q8N4L4 309 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 MEGF9Q9H1U4 602 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 IGHV3OR15-7A0A075B7D8 119 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 ZNF257Q9Y2Q1 563 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 C21orf140B9A014 251 aa15.28■□□□□ 0.04
SMAD4-201ENST00000342988 ITGB1BP1O14713 200 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 GTSCR1Q86UQ5 136 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 C9JCJ5 164 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 REG1BP48304 166 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 GGTLC1Q9BX51 225 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 PIGYQ3MUY2 71 aa15.27■□□□□ 0.04
SMAD4-201ENST00000342988 CLDN14O95500 239 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 FOXQ1Q9C009 403 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 IGF2P01344 180 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM155Q4W5P6 130 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 WDR82Q6UXN9 313 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 RFLNAQ6ZTI6 216 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 CAMTA1Q9Y6Y1 1673 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 AGRNO00468 2067 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 TNFRSF6BO95407 300 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 GAGE13Q4V321 117 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 VSTM2LQ96N03 204 aa15.27■□□□□ 0.03
SMAD4-201ENST00000342988 GFERP55789 205 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms