RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
SYDE1-201ENST00000342784 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 C17orf112F2Z3M2 114 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 RAMP3O60896 148 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 FBLP22087 321 aaKnown RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 TIMP3P35625 211 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 CEBPDP49716 269 aaPredicted RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 RPS20P60866 119 aaKnown RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 DEFB133Q30KQ1 61 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 RALGAPA1Q6GYQ0 2036 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 RELNP78509 3460 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 DEGS1O15121 323 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 CLEC3BP05452 202 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 HERV-K104P63124 156 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 TMEM177Q53S58 311 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 MAFAQ8NHW3 353 aaPredicted RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 HINT2Q9BX68 163 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 KCNIP2Q9NS61 270 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 HIF1ANQ9NWT6 349 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 COL4A2P08572 1712 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 PCNX1Q96RV3 2341 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 IGKV3D-11A0A0A0MRZ8 115 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 SIRPB1O00241 398 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 DHHO43323 396 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 S1PR2O95136 353 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 SRFP11831 508 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 TFF3Q07654 80 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 RPEL1Q2QD12 228 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
SYDE1-201ENST00000342784 ULBP2Q9BZM5 246 aa11.59□□□□□ -0.55
SYDE1-201ENST00000342784 CACNA1HO95180 2353 aa11.58□□□□□ -0.55
SYDE1-201ENST00000342784 NPIPA3F8WFD2 350 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 TUSC2O75896 110 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 BRI3O95415 125 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 YPEL5P62699 121 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 PSG4Q00888 419 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 RSPO1Q2MKA7 263 aaPredicted RBP11.58□□□□□ -0.56
SYDE1-201ENST00000342784 Q8N976 141 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 DOCK10Q96BY6 2186 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 OR2W1Q9Y3N9 320 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 ZNF324O75467 553 aaPredicted RBP11.58□□□□□ -0.56
SYDE1-201ENST00000342784 MT-CO2P00403 227 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 AZU1P20160 251 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 GFRA1P56159 465 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 PMCHL1Q16048 86 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 C5orf64Q2M2E5 130 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 LCN12Q6JVE5 192 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 OCC1Q8TAD7 63 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 GTSF1LQ9H1H1 148 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
SYDE1-201ENST00000342784 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
SYDE1-201ENST00000342784 TIAF1O95411 115 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 CRYGCP07315 174 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 OTX2P32243 289 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 CKS1BP61024 79 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 ASCL4Q6XD76 172 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 MRPL21Q7Z2W9 205 aaKnown RBP11.57□□□□□ -0.56
SYDE1-201ENST00000342784 PNKDQ8N490 385 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 CLDN23Q96B33 292 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 UHRF2Q96PU4 802 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 IL36GQ9NZH8 169 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 TACC2O95359 2948 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 TRAV9-1A0A075B6T8 112 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 IGHV2-26A0A0B4J1V2 119 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 TRAV38-1A0A0B4J264 116 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 IGHV5-51A0A0C4DH38 117 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 G3V4G9 280 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 RNPS1Q15287 305 aaKnown RBP11.57□□□□□ -0.56
SYDE1-201ENST00000342784 Q56UQ5 140 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 TSTD1Q8NFU3 115 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 ATP23Q9Y6H3 246 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 CLDN15P56746 228 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 PHYHD1Q5SRE7 291 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 RAET1LQ5VY80 246 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 MMD2Q8IY49 270 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 NPCDR1Q9BY65 106 aa11.57□□□□□ -0.56
SYDE1-201ENST00000342784 A0A1W2PS18 150 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 B9A039 149 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 GABRG2P18507 467 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 SRIP30626 198 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 OTX1P32242 354 aaPredicted RBP11.56□□□□□ -0.56
SYDE1-201ENST00000342784 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 RDH5Q92781 318 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 FER1L5A0AVI2 2057 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 EDDM3BP56851 147 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 SLC35B1P78383 322 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
SYDE1-201ENST00000342784 FSCN3Q9NQT6 498 aa11.56□□□□□ -0.56
SYDE1-201ENST00000342784 LIN7CQ9NUP9 197 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms