RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 VSIG10L2P0DP72 767 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 AQP3Q92482 292 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 ZFP30Q9Y2G7 519 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
UBE3B-202ENST00000342494 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 LY6DQ14210 128 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 PRSS8Q16651 343 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 C1QTNF12Q5T7M4 302 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 STPG2Q8N412 459 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 OR51M1Q9H341 326 aa12.78□□□□□ -0.36
UBE3B-202ENST00000342494 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 RAMP1O60894 148 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 IGHV3-48P01763 117 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 ZNF146Q15072 292 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.36
UBE3B-202ENST00000342494 CDC42EP3Q9UKI2 254 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 H3BTX0 84 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 HKR1P10072 659 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 EGR4Q05215 589 aa12.77□□□□□ -0.36
UBE3B-202ENST00000342494 P2RY4P51582 365 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 ZNF56Q15929 161 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 FAM159AQ6UWV7 190 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 VWCEQ96DN2 955 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 IGKV1D-33P01593 117 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 IGKV1-33P01594 117 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 SULT1A2P50226 295 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 ADIPOQQ15848 244 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
UBE3B-202ENST00000342494 TDRD6O60522 2096 aaKnown RBP12.76□□□□□ -0.37
UBE3B-202ENST00000342494 H3BVH4 76 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 EFEMP2O95967 443 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 NMUP48645 174 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 CYB561D1Q8N8Q1 229 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 TMEM262E9PQX1 116 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 TMEM177Q53S58 311 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 CBLN2Q8IUK8 224 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 DRAM1Q8N682 238 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 GPR82Q96P67 336 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 RPL39P5Q59GN2 51 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 FBXL15Q9H469 300 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 NUDT3O95989 172 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 TCTAP57738 103 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
UBE3B-202ENST00000342494 C9orf106Q8NAJ2 232 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 LHFPL5Q8TAF8 219 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 ITLN2Q8WWU7 325 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-202ENST00000342494 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 A6NDN8 102 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 IGHV3-23P01764 117 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 RAB37Q96AX2 223 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 CD74P04233 296 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 STAG3L2P0CL84 134 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 RPL24P83731 157 aaKnown RBP12.75□□□□□ -0.37
UBE3B-202ENST00000342494 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-202ENST00000342494 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-202ENST00000342494 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
UBE3B-202ENST00000342494 PGLYRP4Q96LB8 373 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 PPP1R3EQ9H7J1 279 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 IGHV3-49A0A0A0MS15 119 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 TM4SF5O14894 197 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 MOSP00540 346 aa12.75□□□□□ -0.37
UBE3B-202ENST00000342494 EP300Q09472 2414 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-202ENST00000342494 FOCADQ5VW36 1801 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 RTN4RL2Q86UN3 420 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 GCGP01275 180 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 DLX6P56179 175 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 LINC01590Q5TEZ4 76 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 MRPL14Q6P1L8 145 aaKnown RBP12.74□□□□□ -0.37
UBE3B-202ENST00000342494 WDYHV1Q96HA8 205 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 SMDT1Q9H4I9 107 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 PPP1R27Q86WC6 154 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 MAP1LC3AQ9H492 121 aa12.74□□□□□ -0.37
UBE3B-202ENST00000342494 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 FOXI3A8MTJ6 420 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-202ENST00000342494 UMODP07911 640 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 CEACAM4O75871 244 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 MT-ND6P03923 174 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 SLC25A38Q96DW6 304 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 COL4A1P02462 1669 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 ARL14EPLP0DKL9 152 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-202ENST00000342494 NPFFR1Q9GZQ6 430 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms