RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 ERVK-16P61578 105 aa8.55□□□□□ -1.04
LIMA1-201ENST00000341247 CT45A1Q5HYN5 189 aa8.55□□□□□ -1.04
LIMA1-201ENST00000341247 CT45A3Q8NHU0 189 aa8.55□□□□□ -1.04
LIMA1-201ENST00000341247 RND1Q92730 232 aa8.55□□□□□ -1.04
LIMA1-201ENST00000341247 PSMG3Q9BT73 122 aaPredicted RBP8.55□□□□□ -1.04
LIMA1-201ENST00000341247 SFXN3Q9BWM7 321 aa8.55□□□□□ -1.04
LIMA1-201ENST00000341247 PATZ1Q9HBE1 687 aaKnown RBP8.55□□□□□ -1.04
LIMA1-201ENST00000341247 SAA2-SAA4A0A096LPE2 208 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 PMS2P5A8MQ11 134 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 RRHO14718 337 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 PPIHO43447 177 aaKnown RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 SAA2P0DJI9 122 aaPredicted RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 SERF2P84101 59 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 C17orf58Q2M2W7 97 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 FAM90A2PQ658T7 463 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 TMEM140Q9NV12 185 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 OR6C3Q9NZP0 311 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 JPT1Q9UK76 154 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 DYSFO75923 2080 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 C15orf62A8K5M9 175 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 NDUFA2O43678 99 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 IFNA4P05014 189 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 CXCL1P09341 107 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 UBE2G2P60604 165 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 KIAA0141Q14154 515 aaPredicted RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 SP5Q6BEB4 398 aaPredicted RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 NPCDR1Q9BY65 106 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 HPRT1P00492 218 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 OR4A8P0C604 315 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 CEACAM8P31997 349 aaPredicted RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
LIMA1-201ENST00000341247 BSPH1Q075Z2 132 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 FABP9Q0Z7S8 132 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 DPPA3Q6W0C5 159 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 NECAP1Q8NC96 275 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 Q8WTZ3 238 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 CCL17Q92583 94 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 SSX3Q99909 188 aa8.54□□□□□ -1.04
LIMA1-201ENST00000341247 IGLV3-9A0A075B6K5 115 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 TRGV10A0A0A0MS01 117 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 LHBP01229 141 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 IRF2P14316 349 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 ADIRFQ15847 76 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 NCMAPQ5T1S8 102 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 TRAT1Q6PIZ9 186 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 ZNF561Q8N587 486 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 RAB24Q969Q5 203 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 PINX1Q96BK5 328 aaKnown RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 TMEM204Q9BSN7 226 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 AURKAIP1Q9NWT8 199 aaPredicted RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 DPRXA6NFQ7 191 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 C16orf97H3BN30 126 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 YPEL1O60688 119 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 OR8U8P0C7N1 319 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 REG1BP48304 166 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 MRPS11P82912 194 aaKnown RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 SLC16A13Q7RTY0 426 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 OR4F5Q8NH21 305 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 RHOVQ96L33 236 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 YPEL2Q96QA6 119 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 OR4F4Q96R69 305 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 SMDT1Q9H4I9 107 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 LAMP3Q9UQV4 416 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 ZNF98A6NK75 572 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 CYB5BO43169 146 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 TNFSF4P23510 183 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 SSMEM1Q8WWF3 244 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 FAM122AQ96E09 287 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 CIB3Q96Q77 187 aaPredicted RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 GFOD1Q9NXC2 390 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 CISD1Q9NZ45 108 aaKnown RBP8.53□□□□□ -1.04
LIMA1-201ENST00000341247 NCOR2Q9Y618 2525 aa8.53□□□□□ -1.04
LIMA1-201ENST00000341247 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 FAM87AP0C7U9 286 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 CCL3L1P16619 93 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 TMEM108Q6UXF1 575 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 TCF23Q7RTU1 214 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 H1FXQ92522 213 aaKnown RBP8.52□□□□□ -1.05
LIMA1-201ENST00000341247 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 EGLN1Q9GZT9 426 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 TOLLIPQ9H0E2 274 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 PAGE4O60829 102 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 CD1BP29016 333 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 C1orf174Q8IYL3 243 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 VAX2Q9UIW0 290 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 AGAP20933 346 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 CD81P60033 236 aa8.52□□□□□ -1.05
LIMA1-201ENST00000341247 MRGPRGQ86SM5 289 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms