RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TEX45Q8NA69 505 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 ZBTB34Q8NCN2 500 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 ABHD5Q8WTS1 349 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 C4orf3Q8WVX3 66 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 DUX3Q96PT4 197 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 EXTL2Q9UBQ6 330 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 H3BMQ9 156 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 TPPPO94811 219 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 SAA1P0DJI8 122 aaPredicted RBP11.96□□□□□ -0.49
VAPA-201ENST00000340541 GNRHRP30968 328 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
VAPA-201ENST00000340541 PRSS8Q16651 343 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 VMA21Q3ZAQ7 101 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 ACTBL2Q562R1 376 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 VAX1Q5SQQ9 334 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 ASPHD1Q5U4P2 390 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 TMEM17Q86X19 198 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 LAX1Q8IWV1 398 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 GRPEL2Q8TAA5 225 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 ISOC1Q96CN7 298 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 ZNF2Q9BSG1 426 aaPredicted RBP11.96□□□□□ -0.49
VAPA-201ENST00000340541 GNB4Q9HAV0 340 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.49
VAPA-201ENST00000340541 CEPT1Q9Y6K0 416 aa11.96□□□□□ -0.49
VAPA-201ENST00000340541 CCL24O00175 119 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 RAMP3O60896 148 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 RCVRNP35243 200 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 GNB1P62873 340 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 FHL3Q13643 280 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 TMEM65Q6PI78 240 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 FXYD6Q9H0Q3 95 aa11.95□□□□□ -0.5
VAPA-201ENST00000340541 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
VAPA-201ENST00000340541 I3L521 148 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 K7EIL1 84 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 CNIH1O95406 144 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 HERV-K104P61576 105 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 RUNX1Q01196 453 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
VAPA-201ENST00000340541 OR52I2Q8NH67 350 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 DCUN1D5Q9BTE7 237 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 SLIRPQ9GZT3 109 aaKnown RBP11.94□□□□□ -0.5
VAPA-201ENST00000340541 KLK11Q9UBX7 282 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 ZMAT5Q9UDW3 170 aaKnown RBP11.94□□□□□ -0.5
VAPA-201ENST00000340541 SCOCQ9UIL1 159 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 VSIG4Q9Y279 399 aa11.94□□□□□ -0.5
VAPA-201ENST00000340541 RGS5O15539 181 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
VAPA-201ENST00000340541 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 RNASE12Q5GAN4 147 aaKnown RBP11.93□□□□□ -0.5
VAPA-201ENST00000340541 PYHIN1Q6K0P9 492 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 SPAG16Q8N0X2 631 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 OR6F1Q8NGZ6 308 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
VAPA-201ENST00000340541 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
VAPA-201ENST00000340541 MTFP1Q9UDX5 166 aa11.93□□□□□ -0.5
VAPA-201ENST00000340541 KBTBD11O94819 623 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 CATR1Q13166 79 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 DCTN2Q13561 401 aaKnown RBP11.92□□□□□ -0.5
VAPA-201ENST00000340541 TNXAQ16473 311 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 DEFB121Q5J5C9 76 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 TMEM167AQ8TBQ9 72 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 BORCS5Q969J3 196 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 RHOVQ96L33 236 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 OR5B12Q96R08 314 aa11.92□□□□□ -0.5
VAPA-201ENST00000340541 RBM38Q9H0Z9 239 aaKnown RBP11.92□□□□□ -0.5
VAPA-201ENST00000340541 ALX4Q9H161 411 aaPredicted RBP11.92□□□□□ -0.5
VAPA-201ENST00000340541 COL7A1Q02388 2944 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 H3BUA1 57 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 M0QYG6 137 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
VAPA-201ENST00000340541 PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
VAPA-201ENST00000340541 OR2A4O95047 310 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 BRI3O95415 125 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 DGCR2P98153 550 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 POC5Q8NA72 575 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 C15orf40Q8WUR7 153 aa11.91□□□□□ -0.5
VAPA-201ENST00000340541 DPF1Q92782 380 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms