RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 HIST1H1AQ02539 215 aaPredicted RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 RPEL1Q2QD12 228 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 EMC6Q9BV81 110 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 SCRT2Q9NQ03 307 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 STARD5Q9NSY2 213 aa8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 BOKQ9UMX3 212 aaPredicted RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 NCOA6Q14686 2063 aaPredicted RBP8.13□□□□□ -1.11
PTCHD4-201ENST00000339488 SAA2-SAA4A0A096LPE2 208 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 ANKRD30BLA7E2S9 258 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 NUDT14O95848 222 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 PPYP01298 95 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 CCNOP22674 350 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 DPTQ07507 201 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM97Q5BJF2 176 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 CCDC71LQ8N9Z2 235 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 DDB2Q92466 427 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 MED29Q9NX70 200 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 JPT1Q9UK76 154 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 RALGAPA1Q6GYQ0 2036 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 IGKV1D-13A0A0B4J2D9 117 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 NKX2-2O95096 273 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 IGKV1-13P0DP09 117 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 PNMTP11086 282 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 PIGYQ3MUY2 71 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 ETDBQ3ZM63 59 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 EMC4Q5J8M3 183 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 RNFT1Q5M7Z0 435 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 DOLPP1Q86YN1 238 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 VN1R3Q9BXE9 311 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 ATP23Q9Y6H3 246 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 CGAP01215 116 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 GPM6AP51674 278 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 SERF2P84101 59 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 SLC38A11Q08AI6 406 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 CACNG5Q9UF02 275 aa8.12□□□□□ -1.11
PTCHD4-201ENST00000339488 ZNF407Q9C0G0 2248 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 KBTBD11-OT1A0A1B0GTJ5 212 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 VWC2LB2RUY7 222 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 FOXS1O43638 330 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 SCGB2A1O75556 95 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 CA3P07451 260 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 CRYBB3P26998 211 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 CDAP32320 146 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 SHISA6Q6ZSJ9 500 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 OR5A2Q8NGI9 324 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 OR1L1Q8NH94 360 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 VSTM2AQ8TAG5 236 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 NUDT22Q9BRQ3 303 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 CCL28Q9NRJ3 127 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 VPS13AQ96RL7 3174 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 K7ERJ3 54 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 CCL2P13500 99 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 OR1D5P58170 312 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 DOK3Q7L591 496 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 SPEM1Q8N4L4 309 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 RDH5Q92781 318 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 HES4Q9HCC6 221 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 OR1A1Q9P1Q5 309 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 TNFRSF18Q9Y5U5 241 aa8.11□□□□□ -1.11
PTCHD4-201ENST00000339488 HELTA6NFD8 242 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 APCSP02743 223 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 DHRS13Q6UX07 377 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 BPIFA4PQ86YQ2 179 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 TEX45Q8NA69 505 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 S1PR5Q9H228 398 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 SH2D2AQ9NP31 389 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 HSPB6O14558 160 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 CHEK1O14757 476 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 SPINK8P0C7L1 97 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 SPINK9Q5DT21 86 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM215Q68D42 235 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 COLCA1Q6ZS62 124 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM25Q86YD3 366 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 NXF5Q9H1B4 397 aaKnown RBP8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 MOB1AQ9H8S9 216 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms