RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TCTEX1D2Q8WW35 142 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 OR5B12Q96R08 314 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 SLC5A7Q9GZV3 580 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 ALX4Q9H161 411 aaPredicted RBP11.83□□□□□ -0.52
PRKN-201ENST00000338468 AURKAIP1Q9NWT8 199 aaPredicted RBP11.83□□□□□ -0.52
PRKN-201ENST00000338468 EHFQ9NZC4 300 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 PRELID3BQ9Y3B1 194 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 TNFSF12O43508 249 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 CNIH1O95406 144 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 DUS4LO95620 317 aaKnown RBP11.82□□□□□ -0.52
PRKN-201ENST00000338468 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 CLVS1Q8IUQ0 354 aaPredicted RBP11.82□□□□□ -0.52
PRKN-201ENST00000338468 VKORC1L1Q8N0U8 176 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 MIXL1Q9H2W2 232 aa11.82□□□□□ -0.52
PRKN-201ENST00000338468 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
PRKN-201ENST00000338468 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 RAMP3O60896 148 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 GNRHRP30968 328 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 HOXD3P31249 432 aaPredicted RBP11.81□□□□□ -0.52
PRKN-201ENST00000338468 TAS2R46P59540 309 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 PYHIN1Q6K0P9 492 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 AP3S1Q92572 193 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 MOB3AQ96BX8 217 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 ADAM30Q9UKF2 790 aa11.81□□□□□ -0.52
PRKN-201ENST00000338468 TENM3Q9P273 2699 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 MSGN1A6NI15 193 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 HRH1P35367 487 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 RAB25P57735 213 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 TNXAQ16473 311 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 C10orf55Q5SWW7 151 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 PUSL1Q8N0Z8 303 aaKnown RBP11.8□□□□□ -0.52
PRKN-201ENST00000338468 POC5Q8NA72 575 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 OR5H2Q8NGV7 314 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 RHOVQ96L33 236 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 ZNF2Q9BSG1 426 aaPredicted RBP11.8□□□□□ -0.52
PRKN-201ENST00000338468 FXYD6Q9H0Q3 95 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 RYR3Q15413 4870 aa11.8□□□□□ -0.52
PRKN-201ENST00000338468 FAM25AB3EWG3 89 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 FAM25CB3EWG5 89 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 FAM25GB3EWG6 89 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 SULT1C2O00338 296 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
PRKN-201ENST00000338468 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
PRKN-201ENST00000338468 APELAP0DMC3 54 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 RPL5P46777 297 aaKnown RBP11.79□□□□□ -0.52
PRKN-201ENST00000338468 TMBIM6P55061 237 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 TPPP2P59282 170 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 HERV-K104P61576 105 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 DYNC2LI1Q8TCX1 351 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 RAB2BQ8WUD1 216 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
PRKN-201ENST00000338468 TMEM68Q96MH6 324 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 ABHD1Q96SE0 405 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 MCRIP2Q9BUT9 160 aaKnown RBP11.79□□□□□ -0.52
PRKN-201ENST00000338468 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 EXTL2Q9UBQ6 330 aa11.79□□□□□ -0.52
PRKN-201ENST00000338468 A0A1B0GW64 132 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 E7EUB6 86 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 H3BUA1 57 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 CTDSP2O14595 271 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRKN-201ENST00000338468 OR2A4O95047 310 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 BRI3O95415 125 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 TRGV3P03979 118 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 RCVRNP35243 200 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 KIR2DS2P43631 304 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 LAX1Q8IWV1 398 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 TMEM167AQ8TBQ9 72 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 BCL7BQ9BQE9 202 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 KLK11Q9UBX7 282 aa11.78□□□□□ -0.52
PRKN-201ENST00000338468 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 A0A087WW49 117 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 PGLYRP1O75594 196 aaPredicted RBP11.77□□□□□ -0.53
PRKN-201ENST00000338468 KBTBD11O94819 623 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 OR8U8P0C7N1 319 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 DEFA5Q01523 94 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 RNASE12Q5GAN4 147 aaKnown RBP11.77□□□□□ -0.53
PRKN-201ENST00000338468 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 ADAD2Q8NCV1 583 aaKnown RBP11.77□□□□□ -0.53
PRKN-201ENST00000338468 OR6F1Q8NGZ6 308 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 OR51H1Q8NH63 302 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms