RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 GSTT2P0CG29 244 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 GSTT2BP0CG30 244 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 SAA1P0DJI8 122 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-202ENST00000338325 MAP2K4P45985 399 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 EWSR1Q01844 656 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSMD2-202ENST00000338325 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 RAB11BQ15907 218 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 ANKRD55Q3KP44 614 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 MMD2Q8IY49 270 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 C8orf59Q8N0T1 100 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-202ENST00000338325 DHRSXQ8N5I4 330 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 GFI1Q99684 422 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 MND1Q9BWT6 205 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 PLCXD1Q9NUJ7 323 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 MLXQ9UH92 298 aa8.59□□□□□ -1.03
CSMD2-202ENST00000338325 TMEM213A2RRL7 107 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 A8MWP6 167 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 SCAF4O95104 1147 aaKnown RBP8.58□□□□□ -1.04
CSMD2-202ENST00000338325 ARL3P36405 182 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 LYG2Q86SG7 212 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 RPP25LQ8N5L8 163 aaKnown RBP8.58□□□□□ -1.04
CSMD2-202ENST00000338325 BPIFB6Q8NFQ5 453 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 CCDC140Q96MF4 163 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 GINS4Q9BRT9 223 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 FKBP14Q9NWM8 211 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
CSMD2-202ENST00000338325 KLK5Q9Y337 293 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-202ENST00000338325 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 NPIPB5A8MRT5 1133 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 DENRO43583 198 aaKnown RBP8.57□□□□□ -1.04
CSMD2-202ENST00000338325 CDK1P06493 297 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 GNAO1P09471 354 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 BMI1P35226 326 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 CLDN12P56749 244 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 FAM106AQ4KMX7 169 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 CLEC19AQ6UXS0 136 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 PACRGLQ8N7B6 248 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 UXS1Q8NBZ7 420 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 FAM3DQ96BQ1 224 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 C8orf4Q9NR00 106 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 KCNK7Q9Y2U2 307 aa8.57□□□□□ -1.04
CSMD2-202ENST00000338325 AK6Q9Y3D8 172 aaKnown RBP8.57□□□□□ -1.04
CSMD2-202ENST00000338325 ZNF320A2RRD8 509 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 SPRY2O43597 315 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 IGHV3-23P01764 117 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
CSMD2-202ENST00000338325 APOC4P55056 127 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 C2orf76Q3KRA6 126 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 OR4A47Q6IF82 309 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 BTNL8Q6UX41 500 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 Q6ZWC4 215 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 H1FOOQ8IZA3 346 aaPredicted RBP8.56□□□□□ -1.04
CSMD2-202ENST00000338325 FBLIM1Q8WUP2 373 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 MAFIPQ8WZ33 124 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 RAB3CQ96E17 227 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 DCUN1D5Q9BTE7 237 aa8.56□□□□□ -1.04
CSMD2-202ENST00000338325 LSM2Q9Y333 95 aaKnown RBP8.56□□□□□ -1.04
CSMD2-202ENST00000338325 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 TMEM272A0A1B0GTI8 110 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 FCGR3BO75015 233 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 DEDDO75618 318 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 RANBP1P43487 201 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 SPHARQ15513 63 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 MED22Q15528 200 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 DEFB135Q30KP9 77 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 KCTD9Q7L273 389 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 OR1L6Q8NGR2 347 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 UFD1Q92890 307 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 TMEM203Q969S6 136 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 EEF1AKMT3Q96AZ1 226 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
CSMD2-202ENST00000338325 S4R3C0 116 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 DNAH6Q9C0G6 4158 aa8.55□□□□□ -1.04
CSMD2-202ENST00000338325 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 UBE2CO00762 179 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 ARL6IP5O75915 188 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 KBTBD11O94819 623 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 DHFRP00374 187 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 IL6RP08887 468 aaPredicted RBP8.54□□□□□ -1.04
CSMD2-202ENST00000338325 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
CSMD2-202ENST00000338325 PLA2G7Q13093 441 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 LIPKQ5VXJ0 399 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 TMEM91Q6ZNR0 172 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 RBPMS2Q6ZRY4 209 aaKnown RBP8.54□□□□□ -1.04
CSMD2-202ENST00000338325 ZNF645Q8N7E2 425 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 MARC2Q969Z3 335 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
CSMD2-202ENST00000338325 CENPOQ9BU64 300 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 OR51E2Q9H255 320 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 SLC2A9Q9NRM0 540 aa8.54□□□□□ -1.04
CSMD2-202ENST00000338325 RAB22AQ9UL26 194 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms