RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MRPL37Q9BZE1 423 aaKnown RBP11.72□□□□□ -0.53
RTN4-202ENST00000337526 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
RTN4-202ENST00000337526 DLL1O00548 723 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 SYNGR3O43761 229 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 SLC25A17O43808 307 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 ZNF837Q96EG3 531 aaPredicted RBP11.72□□□□□ -0.53
RTN4-202ENST00000337526 DMRT1Q9Y5R6 373 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 NUBP1P53384 320 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 RELBQ01201 579 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 COTL1Q14019 142 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 LCTP09848 1927 aa11.72□□□□□ -0.53
RTN4-202ENST00000337526 SH2D7A6NKC9 451 aaPredicted RBP11.71□□□□□ -0.53
RTN4-202ENST00000337526 LYRM7Q5U5X0 104 aa11.71□□□□□ -0.53
RTN4-202ENST00000337526 RNF126Q9BV68 326 aa11.71□□□□□ -0.53
RTN4-202ENST00000337526 LINC00470Q9BZP3 86 aa11.71□□□□□ -0.53
RTN4-202ENST00000337526 CIDEAO60543 219 aa11.71□□□□□ -0.53
RTN4-202ENST00000337526 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
RTN4-202ENST00000337526 MRPL13Q9BYD1 178 aaKnown RBP11.71□□□□□ -0.53
RTN4-202ENST00000337526 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 TCF21O43680 179 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 PET117Q6UWS5 81 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 WFIKKN1Q96NZ8 548 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 TIMP4Q99727 224 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 MTCL1Q9Y4B5 1905 aaKnown RBP11.71□□□□□ -0.54
RTN4-202ENST00000337526 IDI2-AS1Q9NZ38 188 aa11.71□□□□□ -0.54
RTN4-202ENST00000337526 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.54
RTN4-202ENST00000337526 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 J3QW42 95 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 SPANXN1Q5VSR9 72 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 TP53BP1Q12888 1972 aaPredicted RBP11.7□□□□□ -0.54
RTN4-202ENST00000337526 NPIPB7O75200 414 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTN4-202ENST00000337526 PMCHL1Q16048 86 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 OR4A5Q8NH83 315 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 LOC105371267A0A1B0GV96 52 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 GRIFINA4D1Z8 144 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
RTN4-202ENST00000337526 SRIP30626 198 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 ERVFRD-1P60508 538 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 WDR31Q8NA23 367 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 RTN4RQ9BZR6 473 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 WNT9BO14905 357 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 ZNF738Q8NE65 137 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 FLVCR1-AS1Q8TAF5 88 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 DCAF16Q9NXF7 216 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 CDC42EP3Q9UKI2 254 aa11.7□□□□□ -0.54
RTN4-202ENST00000337526 C12orf77C9JDV5 145 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 SPATA45Q537H7 98 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 KRTCAP3Q53RY4 240 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 H0YIZ8 118 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 SLC25A28Q96A46 364 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 REPIN1Q9BWE0 567 aaKnown RBP11.69□□□□□ -0.54
RTN4-202ENST00000337526 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
RTN4-202ENST00000337526 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
RTN4-202ENST00000337526 GFI1Q99684 422 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 ZFP30Q9Y2G7 519 aa11.69□□□□□ -0.54
RTN4-202ENST00000337526 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 TMEM189A5PLL7 270 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 VENTXO95231 258 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 CELA3AP09093 270 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 FTH1P19P0C7X4 201 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 NMUP48645 174 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 CLDN18P56856 261 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 ATP1A1-AS1Q5TC04 95 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 ABLIM2Q6H8Q1 611 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 DPF1Q92782 380 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 UQCR10Q9UDW1 63 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 PDCD11Q14690 1871 aaKnown RBP11.68□□□□□ -0.54
RTN4-202ENST00000337526 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 CCL21O00585 134 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 KIR2DL2P43627 348 aaPredicted RBP11.68□□□□□ -0.54
RTN4-202ENST00000337526 TCTAP57738 103 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 HERVK_113P61574 105 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 MUC15Q8N387 334 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 GATAD1Q8WUU5 269 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 LPAR2Q9HBW0 351 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 DOCK6Q96HP0 2047 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 DOCK4Q8N1I0 1966 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 RRHO14718 337 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 HTN1P15515 57 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 GCHFRP30047 84 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms