RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 R3HDM4Q96D70 268 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 EAF1Q96JC9 268 aaPredicted RBP17.23■□□□□ 0.35
TPM1-204ENST00000334895 CCSO14618 274 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 KRASP01116 189 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 P0C879 139 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 CNTFRP26992 372 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 BRS3P32247 399 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 Q8N6K4 173 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 HARBI1Q96MB7 349 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 SSX3Q99909 188 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 MED28Q9H204 178 aa17.22■□□□□ 0.35
TPM1-204ENST00000334895 MARCH11A6NNE9 402 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 MPTX1A8MV57 137 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 SHOXO15266 292 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 MOSP00540 346 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 NQO2P16083 231 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 CXCL3P19876 107 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 RPS16P62249 146 aaKnown RBP17.21■□□□□ 0.35
TPM1-204ENST00000334895 HNF4GQ14541 408 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 POU2AF1Q16633 256 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 IZUMO4Q1ZYL8 232 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 LRRC75BQ2VPJ9 315 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 NMSQ5H8A3 153 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 GGNBP1Q5YKI7 109 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 THNSL2Q86YJ6 484 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 OR11H7Q8NGC8 314 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 PRDM13Q9H4Q3 707 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 SULT1A3P0DMM9 295 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 SULT1A4P0DMN0 295 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 SSX9Q7RTT3 188 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 OR2T10Q8NGZ9 312 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 RHOVQ96L33 236 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 RAB18Q9NP72 206 aa17.21■□□□□ 0.35
TPM1-204ENST00000334895 DUXBA0A1W2PPF3 345 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 GOSR2O14653 212 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 HLA-GP17693 338 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 VDAC1P21796 283 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 AKR1C2P52895 323 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 SCGB2A2Q13296 93 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 HES1Q14469 280 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 AANATQ16613 207 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 MGAT4CQ9UBM8 478 aa17.2■□□□□ 0.34
TPM1-204ENST00000334895 SIX6O95475 246 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 HRASP01112 189 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 FAM106CPP0CH98 169 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 SAA1P0DJI8 122 aaPredicted RBP17.19■□□□□ 0.34
TPM1-204ENST00000334895 BCAP31P51572 246 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 F2RL1P55085 397 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 OR4A47Q6IF82 309 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 Q6ZRM9 215 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 LSM10Q969L4 123 aaKnown RBP17.19■□□□□ 0.34
TPM1-204ENST00000334895 GPR146Q96CH1 333 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 RNF5Q99942 180 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 TMEM140Q9NV12 185 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 TMED3Q9Y3Q3 217 aa17.19■□□□□ 0.34
TPM1-204ENST00000334895 H3BUX3 64 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 IL6RP08887 468 aaPredicted RBP17.18■□□□□ 0.34
TPM1-204ENST00000334895 LGALS7P47929 136 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 H2BFSP57053 126 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 Q6YL49 198 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 DMBX1Q8NFW5 382 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 OR5M8Q8NGP6 311 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 OR10C1Q96KK4 312 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 PLSCR3Q9NRY6 295 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 MMP24Q9Y5R2 645 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 HMX3A6NHT5 357 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 IGHV4-59P01825 116 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 TMEM11P17152 192 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 IER3P46695 156 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 ERVK-16P61578 105 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 PSG5Q15238 335 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 PUSL1Q8N0Z8 303 aaKnown RBP17.18■□□□□ 0.34
TPM1-204ENST00000334895 CHAC2Q8WUX2 184 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 WDR89Q96FK6 387 aaPredicted RBP17.18■□□□□ 0.34
TPM1-204ENST00000334895 TPSG1Q9NRR2 321 aa17.18■□□□□ 0.34
TPM1-204ENST00000334895 TRAV3A0A0B4J244 114 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 SLC25A17O43808 307 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 ATG12O94817 140 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 CRYGBP07316 175 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 OR9G9P0C7N8 305 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 UBE2KP61086 200 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 NPBQ8NG41 125 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 RRNAD1Q96FB5 475 aaKnown RBP17.17■□□□□ 0.34
TPM1-204ENST00000334895 TSNAXQ99598 290 aaKnown RBP17.17■□□□□ 0.34
TPM1-204ENST00000334895 CDC42EP3Q9UKI2 254 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 TCF19Q9Y242 345 aa17.17■□□□□ 0.34
TPM1-204ENST00000334895 PIGBOS1A0A0B4J2F0 54 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 MMDQ15546 238 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 MRGPRG-AS1Q2M3A8 158 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 H2BFWTQ7Z2G1 175 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 SIGLECL1Q8N7X8 197 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 RNASE11Q8TAA1 199 aaKnown RBP17.16■□□□□ 0.34
TPM1-204ENST00000334895 ZDHHC16Q969W1 377 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 TNCP24821 2201 aa17.16■□□□□ 0.34
TPM1-204ENST00000334895 SETD2Q9BYW2 2564 aaPredicted RBP17.16■□□□□ 0.34
TPM1-204ENST00000334895 A6NDX4 124 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 FAM25EA8MYX2 175 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 NBR2O15453 112 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 NDUFA3O95167 84 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 IFNA21P01568 189 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms