RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 GPR137BO60478 399 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 B3GALNT1O75752 331 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 CRYGBP07316 175 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 OR4E1P0C645 316 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 LGALS7P47929 136 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 TAS2R31P59538 309 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
CHGA-202ENST00000334654 PSG5Q15238 335 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 FAM71E2Q8N5Q1 922 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 HARBI1Q96MB7 349 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 JMJD8Q96S16 334 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 PRR13Q9NZ81 148 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 INMT-MINDY4F8WBC2 141 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 SHOXO15266 292 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 PRAF2O60831 178 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 SFT2D2O95562 160 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 CDS2O95674 445 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 RAB25P57735 213 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 MMDQ15546 238 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 POU2AF1Q16633 256 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 VKORC1L1Q8N0U8 176 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 OR8H1Q8NGG4 311 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 KCNIP3Q9Y2W7 256 aa13.92□□□□□ -0.18
CHGA-202ENST00000334654 C9orf170A2RU37 121 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 RRHO14718 337 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 NBR2O15453 112 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 PFDN1O60925 122 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 IL6RP08887 468 aaPredicted RBP13.91□□□□□ -0.18
CHGA-202ENST00000334654 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 CBX3Q13185 183 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 PRIMA1Q86XR5 153 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 SEC22AQ96IW7 307 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 RHOVQ96L33 236 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 TMEM56Q96MV1 263 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 TSNAXQ99598 290 aaKnown RBP13.91□□□□□ -0.18
CHGA-202ENST00000334654 COMMD9Q9P000 198 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 TMEM56-RWDD3S4R434 201 aa13.91□□□□□ -0.18
CHGA-202ENST00000334654 FAM181BA6NEQ2 426 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
CHGA-202ENST00000334654 FGF16O43320 207 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 SLC25A17O43808 307 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 SPDEFO95238 335 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 IFNA2P01563 188 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 SERPINE2P07093 398 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 SAA1P0DJI8 122 aaPredicted RBP13.9□□□□□ -0.18
CHGA-202ENST00000334654 RPA2P15927 270 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 VAMP1P23763 118 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 DHRS2Q13268 280 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 ANKRD55Q3KP44 614 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 SELENOHQ8IZQ5 122 aaKnown RBP13.9□□□□□ -0.18
CHGA-202ENST00000334654 PUSL1Q8N0Z8 303 aaKnown RBP13.9□□□□□ -0.18
CHGA-202ENST00000334654 OR52B4Q8NGK2 314 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 FBXL15Q9H469 300 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 TPSG1Q9NRR2 321 aa13.9□□□□□ -0.18
CHGA-202ENST00000334654 ATRQ13535 2644 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 HRASP01112 189 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 IGKV1-5P01602 117 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 P0C879 139 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 NQO2P16083 231 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 UBE2KP61086 200 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 BLCAPP62952 87 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 Q6ZS46 218 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 TAF15Q92804 592 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHGA-202ENST00000334654 R3HDM4Q96D70 268 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 SEC22CQ9BRL7 303 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 C1RLQ9NZP8 487 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
CHGA-202ENST00000334654 SH2D7A6NKC9 451 aaPredicted RBP13.88□□□□□ -0.19
CHGA-202ENST00000334654 MARCH11A6NNE9 402 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 FCN1O00602 326 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 KRASP01116 189 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 HLA-AP01891 365 aaKnown RBP13.88□□□□□ -0.19
CHGA-202ENST00000334654 IL5P05113 134 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 G6PCP35575 357 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 SSX9Q7RTT3 188 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 CADM3Q8N126 398 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 LRTM2Q8N967 370 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 TEX45Q8NA69 505 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
CHGA-202ENST00000334654 METTL1Q9UBP6 276 aaKnown RBP13.88□□□□□ -0.19
CHGA-202ENST00000334654 A0A0B4J293 547 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 A0A0G2JRQ6 117 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 DUS4LO95620 317 aaKnown RBP13.87□□□□□ -0.19
CHGA-202ENST00000334654 SSBP2P81877 361 aaPredicted RBP13.87□□□□□ -0.19
CHGA-202ENST00000334654 RELBQ01201 579 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 PJVKQ0ZLH3 352 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TATDN3Q17R31 274 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 C4orf46Q504U0 113 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 OR4A47Q6IF82 309 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 CASTOR1Q8WTX7 329 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 RBPMSQ93062 196 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms