RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PARD6AQ9NPB6 346 aa19.38■□□□□ 0.69
NDEL1-201ENST00000334527 ELOA3CA0A087WX78 387 aaPredicted RBP19.37■□□□□ 0.69
NDEL1-201ENST00000334527 MBD3L4A6NDZ8 208 aaPredicted RBP19.37■□□□□ 0.69
NDEL1-201ENST00000334527 MBD3L3A6NE82 208 aaPredicted RBP19.37■□□□□ 0.69
NDEL1-201ENST00000334527 MBD3L5A6NJ08 208 aaPredicted RBP19.37■□□□□ 0.69
NDEL1-201ENST00000334527 FAM90A9PA6NNJ1 464 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 IFNA10P01566 189 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 ZNF134P52741 427 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 LOXL3P58215 753 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 SPCS3P61009 180 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 MBD3L2Q8NHZ7 208 aaPredicted RBP19.37■□□□□ 0.69
NDEL1-201ENST00000334527 GPR61Q9BZJ8 451 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 HCFC1P51610 2035 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 PHOX2AO14813 284 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 CFHR2P36980 270 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 CR1LQ2VPA4 569 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 OR10A7Q8NGE5 316 aa19.37■□□□□ 0.69
NDEL1-201ENST00000334527 SMCO3A2RU48 225 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 IGHV2-70P01814 119 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 PFN1P07737 140 aaKnown RBP19.36■□□□□ 0.69
NDEL1-201ENST00000334527 ERVK-16P61578 105 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 GCSAMLQ5JQS6 135 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 OR10D4PQ8NGN7 298 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 S100PBPQ96BU1 408 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 NEIL1Q96FI4 390 aaPredicted RBP19.36■□□□□ 0.69
NDEL1-201ENST00000334527 MEGF10Q96KG7 1140 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 DIRC2Q96SL1 478 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 IFI27L2Q9H2X8 130 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 RPP30P78346 268 aaKnown RBP19.36■□□□□ 0.69
NDEL1-201ENST00000334527 VHLLQ6RSH7 139 aa19.36■□□□□ 0.69
NDEL1-201ENST00000334527 HEYLQ9NQ87 328 aaPredicted RBP19.36■□□□□ 0.69
NDEL1-201ENST00000334527 TRAV38-1A0A0B4J264 116 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 H7BYZ3 331 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 F2RL2O00254 374 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 SPRY3O43610 288 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 LY86O95711 162 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 RTP5Q14D33 572 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 FAM216AQ8WUB2 273 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 S1PR3Q99500 378 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 C11orf94C9JXX5 98 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 RBFOX2O43251 390 aaKnown RBP eCLIP19.35■□□□□ 0.695e-9■■■■■ 99.6
NDEL1-201ENST00000334527 GALR1P47211 349 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 KLF3P57682 345 aaPredicted RBP19.35■□□□□ 0.69
NDEL1-201ENST00000334527 ZADH2Q8N4Q0 377 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 CALYQ9NYX4 217 aa19.35■□□□□ 0.69
NDEL1-201ENST00000334527 SVILO95425 2214 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 RRHO14718 337 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 NDUFS6O75380 124 aaKnown RBP19.34■□□□□ 0.69
NDEL1-201ENST00000334527 LEAP2Q969E1 77 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 OR5B12Q96R08 314 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 TRAV3A0A0B4J244 114 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 SLC31A2O15432 143 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 CRYAAP02489 173 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 GYPAP02724 150 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 ZNF474Q6S9Z5 364 aaPredicted RBP19.34■□□□□ 0.69
NDEL1-201ENST00000334527 SRD5A3Q9H8P0 318 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 GAB2Q9UQC2 676 aa19.34■□□□□ 0.69
NDEL1-201ENST00000334527 VDAC2P45880 294 aaPredicted RBP19.33■□□□□ 0.69
NDEL1-201ENST00000334527 RELBQ01201 579 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 TIMM23BQ5SRD1 257 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 UTF1Q5T230 341 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 OR51G1Q8NGK1 321 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 OR52E5Q8NH55 327 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 ITLN1Q8WWA0 313 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 PYGO2Q9BRQ0 406 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 TMEM140Q9NV12 185 aa19.33■□□□□ 0.69
NDEL1-201ENST00000334527 TRAV20A0A0B4J274 112 aa19.33■□□□□ 0.68
NDEL1-201ENST00000334527 CEACAM4O75871 244 aa19.33■□□□□ 0.68
NDEL1-201ENST00000334527 FAM201AQ5SY85 155 aa19.33■□□□□ 0.68
NDEL1-201ENST00000334527 A0A1W2PPV4 95 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 SELLP14151 372 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 BMP5P22003 454 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 NPPCP23582 126 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 C1orf229Q6ZS94 237 aaPredicted RBP19.32■□□□□ 0.68
NDEL1-201ENST00000334527 OR4X1Q8NH49 305 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 ELOVL1Q9BW60 279 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 MPDU1O75352 247 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 LHBP01229 141 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 UBE2G2P60604 165 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 CDPF1Q6NVV7 123 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 TREML4Q6UXN2 200 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 RPRMLQ8N4K4 120 aa19.32■□□□□ 0.68
NDEL1-201ENST00000334527 PATZ1Q9HBE1 687 aaKnown RBP19.32■□□□□ 0.68
NDEL1-201ENST00000334527 GFRA3O60609 400 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 FABP4P15090 132 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 GLRXP35754 106 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 KIR2DS2P43631 304 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 PDLIM3Q53GG5 364 aaPredicted RBP19.31■□□□□ 0.68
NDEL1-201ENST00000334527 ABHD12Q8N2K0 398 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 DMRT1Q9Y5R6 373 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 CACNA1HO95180 2353 aa19.31■□□□□ 0.68
NDEL1-201ENST00000334527 DDB2Q92466 427 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 RAB1CQ92928 201 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 MS4A5Q9H3V2 200 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 TET2Q6N021 2002 aaPredicted RBP19.3■□□□□ 0.68
NDEL1-201ENST00000334527 PRSS46E5RG02 174 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 VENTXO95231 258 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 HRASP01112 189 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 OPRK1P41145 380 aa19.3■□□□□ 0.68
NDEL1-201ENST00000334527 CLEC12BQ2HXU8 276 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms