RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 RFESDQ8TAC1 157 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 RAB24Q969Q5 203 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 ANAPC16Q96DE5 110 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 NEIL1Q96FI4 390 aaPredicted RBP8.89□□□□□ -0.99
CCDC172-201ENST00000333254 S1PR3Q99500 378 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 SSX3Q99909 188 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 DCTN5Q9BTE1 182 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 QTRT1Q9BXR0 403 aaKnown RBP8.89□□□□□ -0.99
CCDC172-201ENST00000333254 OR51M1Q9H341 326 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 SLC25A22Q9H936 323 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 CHODLQ9H9P2 273 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 DOK5Q9P104 306 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 RNF7Q9UBF6 113 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 CACNA1HO95180 2353 aa8.89□□□□□ -0.99
CCDC172-201ENST00000333254 TGIF2-C20orf24A0A0A6YYL0 155 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 KBTBD11-OT1A0A1B0GTJ5 212 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 C15orf61A6NNL5 157 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 M0R1B8 84 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 M0R1X1 148 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 PHOX2AO14813 284 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 PDE6DO43924 150 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 GFRA3O60609 400 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 FCGR3BO75015 233 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 TFF1P04155 84 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 CD99P14209 185 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 S100PP25815 95 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF83P51522 516 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 SELENOVP59797 346 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 C17orf58Q2M2W7 97 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 BSXQ3C1V8 233 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 MOGAT3Q86VF5 341 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF439Q8NDP4 499 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 OR10A7Q8NGE5 316 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 PARLQ9H300 379 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 DEFB108AA8MXU0 73 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 F6UZH7 168 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 TMPRSS2O15393 492 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 PFN1P07737 140 aaKnown RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 RPL23P62829 140 aaKnown RBP8.88□□□□□ -0.99
CCDC172-201ENST00000333254 TEX36Q5VZQ5 186 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 SRD5A3Q9H8P0 318 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
CCDC172-201ENST00000333254 DYSFO75923 2080 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 TRGV10A0A0A0MS01 117 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 IL6RP08887 468 aaPredicted RBP8.87□□□□□ -0.99
CCDC172-201ENST00000333254 TNFSF4P23510 183 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF134P52741 427 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 HOXA4Q00056 320 aaPredicted RBP8.87□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF788Q6ZQV5 615 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 NANPQ8TBE9 248 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 TMEM14BQ9NUH8 114 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 TMEM140Q9NV12 185 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 ZNF257Q9Y2Q1 563 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 LSM4Q9Y4Z0 139 aaKnown RBP8.87□□□□□ -0.99
CCDC172-201ENST00000333254 URGCP-MRPS24S4R325 110 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
CCDC172-201ENST00000333254 URB1O60287 2271 aaKnown RBP8.86□□□□□ -0.99
CCDC172-201ENST00000333254 TYMSP04818 313 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 S100A2P29034 98 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 SRP14P37108 136 aaKnown RBP8.86□□□□□ -0.99
CCDC172-201ENST00000333254 HSPE1P61604 102 aaKnown RBP8.86□□□□□ -0.99
CCDC172-201ENST00000333254 TLE1Q04724 770 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 SSX2Q16385 188 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 SLC16A13Q7RTY0 426 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 OR51G1Q8NGK1 321 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 IMMP2LQ96T52 175 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 GCM1Q9NP62 436 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
CCDC172-201ENST00000333254 GAR1Q9NY12 217 aaKnown RBP8.86□□□□□ -0.99
CCDC172-201ENST00000333254 IDI2-AS1Q9NZ38 188 aa8.86□□□□□ -0.99
CCDC172-201ENST00000333254 A8MXE2 369 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 H7BYZ3 331 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 PPP1R2P9O14990 202 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 HRASP01112 189 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 IFNA10P01566 189 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 IGHV1-46P01743 117 aa8.85□□□□□ -0.99
CCDC172-201ENST00000333254 TRGC2P03986 189 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms