RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 OR2M7Q8NG81 312 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 RDH5Q92781 318 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 SLC17A3O00476 420 aa15.27■□□□□ 0.04
PKP3-201ENST00000331563 SMIM21Q3B7S5 101 aa15.27■□□□□ 0.04
PKP3-201ENST00000331563 ERASQ7Z444 233 aa15.27■□□□□ 0.04
PKP3-201ENST00000331563 OR10P1Q8NGE3 313 aa15.27■□□□□ 0.04
PKP3-201ENST00000331563 MRPL27Q9P0M9 148 aaKnown RBP15.27■□□□□ 0.04
PKP3-201ENST00000331563 IGHV2-26A0A0B4J1V2 119 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 IGLC7A0M8Q6 106 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 TMPRSS2O15393 492 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 VAMP5O95183 116 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 ARR3P36575 388 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.03
PKP3-201ENST00000331563 OR4A47Q6IF82 309 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 PCSK4Q6UW60 755 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 NIT1Q86X76 327 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 ATOH7Q8N100 152 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 UBALD1Q8TB05 177 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 LRFN3Q9BTN0 628 aa15.27■□□□□ 0.03
PKP3-201ENST00000331563 ZFHX2Q9C0A1 2572 aaPredicted RBP15.27■□□□□ 0.03
PKP3-201ENST00000331563 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 hCG_38984A0A1B0GV85 526 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 SPINK2P20155 84 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 OTX2P32243 289 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 VWA1Q6PCB0 445 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 S100A7AQ86SG5 101 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 OR5P3Q8WZ94 311 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 SPACA9Q96E40 222 aaPredicted RBP15.26■□□□□ 0.03
PKP3-201ENST00000331563 NRN1Q9NPD7 142 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 C19orf25Q9UFG5 118 aaPredicted RBP15.26■□□□□ 0.03
PKP3-201ENST00000331563 DOCK10Q96BY6 2186 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 IGHV1-45A0A0A0MS14 117 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 TRAV38-1A0A0B4J264 116 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 A0A1W2PPV4 95 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 SPINK4O60575 86 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 SMPD2O60906 423 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 GPX1P07203 203 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 GPM6AP51674 278 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 ZNF324BQ6AW86 544 aaPredicted RBP15.26■□□□□ 0.03
PKP3-201ENST00000331563 C20orf204Q6ZNR8 217 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 NPCDR1Q9BY65 106 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 OR1A1Q9P1Q5 309 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 MED13Q9UHV7 2174 aa15.26■□□□□ 0.03
PKP3-201ENST00000331563 CORTO00230 105 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 COX6A1P12074 109 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 GABRA2P47869 451 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 NHLH1Q02575 133 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 TMEM14EPQ6UXP3 125 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 PNKDQ8N490 385 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 OR1L1Q8NH94 360 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 ZNF891A8MT65 544 aaPredicted RBP15.25■□□□□ 0.03
PKP3-201ENST00000331563 SIRPB1O00241 398 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 RBMXL2O75526 392 aaKnown RBP15.25■□□□□ 0.03
PKP3-201ENST00000331563 CCL3P10147 92 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 CCNOP22674 350 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 HLA-DRB5Q30154 266 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 OR5B3Q8NH48 314 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 APOBEC3DQ96AK3 386 aaPredicted RBP15.25■□□□□ 0.03
PKP3-201ENST00000331563 TRAPPC2LH3BP13 241 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 ZNHIT1O43257 154 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 TIMP3P35625 211 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 HTD2P86397 168 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 PSG4Q00888 419 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 KRTCAP3Q53RY4 240 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 FOXL2NBQ6ZUU3 175 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 FGFRL1Q8N441 504 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 GNB4Q9HAV0 340 aa15.25■□□□□ 0.03
PKP3-201ENST00000331563 CHCHD2Q9Y6H1 151 aaPredicted RBP15.25■□□□□ 0.03
PKP3-201ENST00000331563 ZNF253O75346 499 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 FRMD6-AS1P0C7T7 363 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 FGF12P61328 243 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 SRSF7Q16629 238 aaKnown RBP eCLIP15.24■□□□□ 0.03
PKP3-201ENST00000331563 GCSAMLQ5JQS6 135 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 OCC1Q8TAD7 63 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 KCNIP2Q9NS61 270 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 LIN7CQ9NUP9 197 aaKnown RBP15.24■□□□□ 0.03
PKP3-201ENST00000331563 TRBV20OR9-2A0A075B6H5 130 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 TNFSF11O14788 317 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 KIAA1644Q3SXP7 199 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 LRRC10Q5BKY1 277 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 WFDC8Q8IUA0 241 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 UHRF2Q96PU4 802 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 QTRT1Q9BXR0 403 aaKnown RBP15.24■□□□□ 0.03
PKP3-201ENST00000331563 LOXL2Q9Y4K0 774 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 OTOGLQ3ZCN5 2332 aa15.24■□□□□ 0.03
PKP3-201ENST00000331563 DSPP15924 2871 aaKnown RBP15.23■□□□□ 0.03
PKP3-201ENST00000331563 GAGE12BA1L429 117 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A10PA6NDY2 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A18PA6NE21 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A16PA6NEW6 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A20PA6NIJ5 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A8PA6NJQ4 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A7PA6NKC0 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A22PA8MWA6 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A12PA8MX19 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A5PA8MXJ8 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 FAM90A23PA8MXZ1 464 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 C17orf112F2Z3M2 114 aa15.23■□□□□ 0.03
PKP3-201ENST00000331563 TOX4O94842 621 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms