RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TIAF1O95411 115 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 IGHV3-43DP0DP04 118 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 CAMPP49913 170 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 SRYQ05066 204 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 ASCL4Q6XD76 172 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 CLEC5AQ9NY25 188 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 OBP2AQ9NY56 170 aa17.31■□□□□ 0.36
CMTM4-201ENST00000330687 Q5PR19 223 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 Q8N976 141 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 RFESDQ8TAC1 157 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 HEYLQ9NQ87 328 aaPredicted RBP17.3■□□□□ 0.36
CMTM4-201ENST00000330687 TMEM38BQ9NVV0 291 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 DNAJC13O75165 2243 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 LRP5LA4QPB2 252 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 GOSR1O95249 250 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 SPATA31B1PQ5VZV4 182 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 NAA38Q9BRA0 125 aaKnown RBP17.3■□□□□ 0.36
CMTM4-201ENST00000330687 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.3■□□□□ 0.36
CMTM4-201ENST00000330687 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 YTHDF2Q9Y5A9 579 aaKnown RBP17.3■□□□□ 0.36
CMTM4-201ENST00000330687 ICE1Q9Y2F5 2266 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 IGHV2-70DA0A0C4DH43 119 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 RRHO14718 337 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 NGFP01138 241 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 CD1BP29016 333 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 TRIM61Q5EBN2 209 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 ZIC4Q8N9L1 334 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 MEGF9Q9H1U4 602 aa17.3■□□□□ 0.36
CMTM4-201ENST00000330687 TECRQ9NZ01 308 aaKnown RBP17.3■□□□□ 0.36
CMTM4-201ENST00000330687 RNF212BA8MTL3 300 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 IGLL1P15814 213 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 RIPPLY2Q5TAB7 128 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 TMEM54Q969K7 222 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 TIMM9Q9Y5J7 89 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 ABCA1O95477 2261 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 ZNF891A8MT65 544 aaPredicted RBP17.29■□□□□ 0.36
CMTM4-201ENST00000330687 CCL3P10147 92 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 CEBPDP49716 269 aaPredicted RBP17.29■□□□□ 0.36
CMTM4-201ENST00000330687 PRRX1P54821 245 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 HOXA4Q00056 320 aaPredicted RBP17.29■□□□□ 0.36
CMTM4-201ENST00000330687 PLXDC1Q8IUK5 500 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 Q8NFD4 153 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 OR4P4Q8NGL7 312 aa17.29■□□□□ 0.36
CMTM4-201ENST00000330687 GNG4P50150 75 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
CMTM4-201ENST00000330687 DLL3Q9NYJ7 618 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 ATG2AQ2TAZ0 1938 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 TRAV24A0A0B4J272 114 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 K7EP13 123 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 RAC2P15153 192 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 CRYBB3P26998 211 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 CA7P43166 264 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 CFHR1Q03591 330 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 FGF23Q9GZV9 251 aaPredicted RBP17.28■□□□□ 0.36
CMTM4-201ENST00000330687 LGALS4P56470 323 aa17.28■□□□□ 0.36
CMTM4-201ENST00000330687 SH2D7A6NKC9 451 aaPredicted RBP17.27■□□□□ 0.36
CMTM4-201ENST00000330687 FOXH1O75593 365 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 RPL30P62888 115 aaKnown RBP17.27■□□□□ 0.36
CMTM4-201ENST00000330687 HES3Q5TGS1 186 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 TMEM42Q69YG0 159 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 GCNT2Q8N0V5 402 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 PMCHL2Q9BQD1 86 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 SSBP4Q9BWG4 385 aaPredicted RBP17.27■□□□□ 0.36
CMTM4-201ENST00000330687 HSPB7Q9UBY9 170 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 LILRA5A6NI73 299 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 LRRC30A6NM36 301 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 TMPRSS2O15393 492 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 DUX1O43812 170 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 SAP30O75446 220 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 VKORC1L1Q8N0U8 176 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 TPRX1Q8N7U7 411 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 TSKUQ8WUA8 353 aa17.27■□□□□ 0.36
CMTM4-201ENST00000330687 REPIN1Q9BWE0 567 aaKnown RBP17.27■□□□□ 0.36
CMTM4-201ENST00000330687 C17orf98A8MV24 154 aa17.27■□□□□ 0.35
CMTM4-201ENST00000330687 USF1P22415 310 aaPredicted RBP17.27■□□□□ 0.35
CMTM4-201ENST00000330687 HYAL1Q12794 435 aa17.27■□□□□ 0.35
CMTM4-201ENST00000330687 ZNF331Q9NQX6 463 aaPredicted RBP17.27■□□□□ 0.35
CMTM4-201ENST00000330687 MUC21A0A0G2JKD1 596 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 MUC21A0A140T8X8 626 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 VEGFBP49765 207 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 TNXAQ16473 311 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 CENPWQ5EE01 88 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 MUC21Q5SSG8 566 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 STPG3Q8N7X2 389 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 MRGPRDQ8TDS7 321 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 ABHD3Q8WU67 409 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 GP6Q9HCN6 339 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 IGHV1OR21-1A0A087WYE8 117 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 CGAP01215 116 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 TFF1P04155 84 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 C1orf185Q5T7R7 199 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 NIT1Q86X76 327 aa17.26■□□□□ 0.35
CMTM4-201ENST00000330687 NFAM1Q8NET5 270 aaPredicted RBP17.26■□□□□ 0.35
CMTM4-201ENST00000330687 A0A1W2PPC4 97 aa17.25■□□□□ 0.35
CMTM4-201ENST00000330687 hDV102S1A0JD36 115 aa17.25■□□□□ 0.35
CMTM4-201ENST00000330687 APOA2P02652 100 aa17.25■□□□□ 0.35
CMTM4-201ENST00000330687 APCSP02743 223 aa17.25■□□□□ 0.35
CMTM4-201ENST00000330687 GABRA6Q16445 453 aa17.25■□□□□ 0.35
CMTM4-201ENST00000330687 OR2T6Q8NHC8 308 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms