RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 MRPL37Q9BZE1 423 aaKnown RBP13.36□□□□□ -0.27
USHBP1-202ENST00000324554 WASF3Q9UPY6 502 aa13.36□□□□□ -0.27
USHBP1-202ENST00000324554 TMEM250H0YL14 139 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 GAMTQ14353 236 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 EDDM3AQ14507 147 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 ALKBH2Q6NS38 261 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 OR51G1Q8NGK1 321 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 OR4F5Q8NH21 305 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 STARD4Q96DR4 205 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 OR4F4Q96R69 305 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 HSD17B10Q99714 261 aaKnown RBP13.35□□□□□ -0.27
USHBP1-202ENST00000324554 PYGO2Q9BRQ0 406 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 ELOVL1Q9BW60 279 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 SPINT2O43291 252 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 CGAP01215 116 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 EGR1P18146 543 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 PRDX2P32119 198 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 HTD2P86397 168 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 SEM1Q6ZVN7 128 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 PACRGQ96M98 296 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-202ENST00000324554 CIB3Q96Q77 187 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-202ENST00000324554 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 PROCRQ9UNN8 238 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 GAB2Q9UQC2 676 aa13.35□□□□□ -0.27
USHBP1-202ENST00000324554 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
USHBP1-202ENST00000324554 RBMXL2O75526 392 aaKnown RBP13.34□□□□□ -0.27
USHBP1-202ENST00000324554 LY86O95711 162 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 ADH4P08319 380 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 LTC4SQ16873 150 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 CLEC12BQ2HXU8 276 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-202ENST00000324554 OR2Z1Q8NG97 314 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 PITPNC1Q9UKF7 332 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 PTPRQQ9UMZ3 2332 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 AHRRA9YTQ3 701 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 PAGE4O60829 102 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 MSMPQ1L6U9 139 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 VWC2Q2TAL6 325 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
USHBP1-202ENST00000324554 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 MBP02144 154 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 GALR1P47211 349 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 P2RY6Q15077 328 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 RHOVQ96L33 236 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 ACTR3CQ9C0K3 210 aaPredicted RBP13.33□□□□□ -0.27
USHBP1-202ENST00000324554 GFOD1Q9NXC2 390 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.27
USHBP1-202ENST00000324554 RELNP78509 3460 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 SRRM5B3KS81 715 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 H7BYZ3 331 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 PROP1O75360 226 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 NDUFS6O75380 124 aaKnown RBP13.33□□□□□ -0.28
USHBP1-202ENST00000324554 GPX4P36969 197 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-202ENST00000324554 MZT1Q08AG7 82 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 C1orf174Q8IYL3 243 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
USHBP1-202ENST00000324554 Q8N7P7 452 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
USHBP1-202ENST00000324554 MANBALQ9NQG1 85 aa13.33□□□□□ -0.28
USHBP1-202ENST00000324554 NPPCP23582 126 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
USHBP1-202ENST00000324554 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 TMEM183AQ8IXX5 376 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 R3HDM4Q96D70 268 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 PLPPR2Q96GM1 343 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 PCGF1Q9BSM1 259 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 C15orf62A8K5M9 175 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 OR9G9P0C7N8 305 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 FAM87AP0C7U9 286 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 GPR12P47775 334 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 GCSAMLQ5JQS6 135 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 QTRT1Q9BXR0 403 aaKnown RBP13.32□□□□□ -0.28
USHBP1-202ENST00000324554 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 ZGRF1Q86YA3 2104 aa13.32□□□□□ -0.28
USHBP1-202ENST00000324554 GNB2P62879 340 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 DEFA6Q01524 100 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 TBR1Q16650 682 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 SH3BGRL2Q9UJC5 107 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 RAXQ9Y2V3 346 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 A0A1W2PPQ1 181 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 GYPAP02724 150 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 BMP5P22003 454 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 MORN2Q502X0 79 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 GCSAMQ8N6F7 178 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 GNG12Q9UBI6 72 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 JPT1Q9UK76 154 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 FAM215AQ9Y5M1 114 aa13.31□□□□□ -0.28
USHBP1-202ENST00000324554 CHD8Q9HCK8 2581 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 SMCO3A2RU48 225 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 MBD3L4A6NDZ8 208 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 MBD3L3A6NE82 208 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 MBD3L5A6NJ08 208 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 DLL1O00548 723 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 FCGR3BO75015 233 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms