RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HIST3H3Q16695 136 aa12.96□□□□□ -0.34
VARS2-201ENST00000321897 C10orf35Q96D05 121 aa12.96□□□□□ -0.34
VARS2-201ENST00000321897 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 NPIPB13A6NJU9 1138 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 NPIPB4C9JG80 1138 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
VARS2-201ENST00000321897 MRPL18Q9H0U6 180 aaKnown RBP12.95□□□□□ -0.34
VARS2-201ENST00000321897 PPIAL4AQ9Y536 164 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 LOC390937A0A1W2PQ73 354 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 B4E171 279 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 PRRG2O14669 202 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 TSPAN7P41732 249 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 UCP2P55851 309 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 UBE2G1P62253 170 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
VARS2-201ENST00000321897 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
VARS2-201ENST00000321897 PRDM13Q9H4Q3 707 aa12.95□□□□□ -0.34
VARS2-201ENST00000321897 WDFY4Q6ZS81 3184 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 A0A087WWC5 75 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 HBZP02008 142 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 FCER1GP30273 86 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 LINC00205P59089 165 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 PRR31Q5SQ13 230 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 FGFRL1Q8N441 504 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 ZNRF1Q8ND25 227 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 ZNF738Q8NE65 137 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 NABP1Q96AH0 204 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 ZNF703Q9H7S9 590 aaPredicted RBP12.94□□□□□ -0.34
VARS2-201ENST00000321897 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 IFNL4K9M1U5 179 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
VARS2-201ENST00000321897 SERF2P84101 59 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 LHFPL1Q86WI0 220 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 CISD2Q8N5K1 135 aaKnown RBP12.94□□□□□ -0.34
VARS2-201ENST00000321897 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 ZNF716A6NP11 495 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 NTF4P34130 210 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 RPL24P83731 157 aaKnown RBP12.94□□□□□ -0.34
VARS2-201ENST00000321897 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
VARS2-201ENST00000321897 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 SEMA5BQ9P283 1151 aa12.94□□□□□ -0.34
VARS2-201ENST00000321897 MMDQ15546 238 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 R3HDM4Q96D70 268 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 SNHG12Q9BXW3 62 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 CHEK1O14757 476 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 C1QTNF9P0C862 333 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 PSG5Q15238 335 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 RIPPLY2Q5TAB7 128 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 TECTAO75443 2155 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 NPSP0C0P6 89 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 C10orf91Q5T1B1 145 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 OR4A47Q6IF82 309 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 IGHV3-72A0A0B4J1Y9 119 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 DNPH1O43598 174 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 ZG16O60844 167 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 YLPM1P49750 1951 aaKnown RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 SRSF4Q08170 494 aaKnown RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 C1QL4Q86Z23 238 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 KLF14Q8TD94 323 aaPredicted RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 ALPK3Q96L96 1907 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 HSD17B10Q99714 261 aaKnown RBP12.93□□□□□ -0.34
VARS2-201ENST00000321897 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
VARS2-201ENST00000321897 BRS3P32247 399 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 CYP2G1PQ6ZSU1 146 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 OR5R1Q8NH85 324 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 MALRD1Q5VYJ5 2156 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 DLEU1O43261 78 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 CLDN14O95500 239 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 ATP5G3P48201 142 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 TNFAIP6P98066 277 aaPredicted RBP12.92□□□□□ -0.34
VARS2-201ENST00000321897 TRGV10A0A0A0MS01 117 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 A8MWP6 167 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 C21orf140B9A014 251 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 SERF1AO75920 110 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 CNIH1O95406 144 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 FAM214BQ7L5A3 538 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 OR2D3Q8NGH3 330 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
VARS2-201ENST00000321897 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
VARS2-201ENST00000321897 NEURL1O76050 574 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 S1PR2O95136 353 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 SRIP30626 198 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 ZNF137PP52743 207 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
VARS2-201ENST00000321897 MIC13Q5XKP0 118 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 ABLIM2Q6H8Q1 611 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 Q8IYB0 196 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms