RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 NMSQ5H8A3 153 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
PACS1-201ENST00000320580 CRIM1Q9NZV1 1036 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 TRAV9-1A0A075B6T8 112 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 SSR4P51571 173 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 SMIM21Q3B7S5 101 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 FNDC7Q5VTL7 733 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 FAM216AQ8WUB2 273 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 ZDHHC16Q969W1 377 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 TMEM186Q96B77 213 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 GTSF1LQ9H1H1 148 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 CLEC5AQ9NY25 188 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 CLEC1BQ9P126 229 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 TMEM30CPA0ZSE6 113 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 OR1C1Q15619 314 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 RTL8BQ17RB0 113 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 OR2M3Q8NG83 312 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 OR4S2Q8NH73 311 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 LYZL4Q96KX0 146 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 C1orf147Q96MC9 270 aaPredicted RBP14.12□□□□□ -0.15
PACS1-201ENST00000320580 DUSP13Q9UII6 198 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 KIAA2026Q5HYC2 2103 aa14.12□□□□□ -0.15
PACS1-201ENST00000320580 MUC21A0A0G2JKD1 596 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 MUC21A0A140T8X8 626 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 C5orf63A6NC05 138 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 GCHFRP30047 84 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 FGF12P61328 243 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ARF6P62330 175 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ZNF726P1Q15940 193 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 MUC21Q5SSG8 566 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 TEPPQ6URK8 271 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ADTRPQ96IZ2 230 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ANAPC10Q9UM13 185 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 DNAJC13O75165 2243 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 IL18BPO95998 194 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 FAM87AP0C7U9 286 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 GCSHP23434 173 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 SCRT1Q9BWW7 348 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ARHGEF17Q96PE2 2063 aaPredicted RBP14.11□□□□□ -0.15
PACS1-201ENST00000320580 TMEM265A0A087WTH1 108 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 ZIC3O60481 467 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 KCNMB1Q16558 191 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 TMEM45BQ96B21 275 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 OBP2AQ9NY56 170 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 GPR183P32249 361 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 IGLV3-21P80748 117 aaPredicted RBP14.11□□□□□ -0.15
PACS1-201ENST00000320580 ARL16Q0P5N6 197 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 BLNKQ8WV28 456 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 YPEL4Q96NS1 127 aa14.11□□□□□ -0.15
PACS1-201ENST00000320580 GFRA1P56159 465 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 SIGMAR1Q99720 223 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 GNB1LQ9BYB4 327 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 F11RQ9Y624 299 aaKnown RBP14.1□□□□□ -0.15
PACS1-201ENST00000320580 SPTY2D1-AS1A0A0U1RR47 76 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 HBZP02008 142 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 PYGO2Q9BRQ0 406 aa14.1□□□□□ -0.15
PACS1-201ENST00000320580 MPDU1O75352 247 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 NPY1RP25929 384 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 OR2K2Q8NGT1 345 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 NPVFQ9HCQ7 196 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 OR10J3Q5JRS4 329 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 CXorf67Q86X51 503 aaPredicted RBP14.09□□□□□ -0.15
PACS1-201ENST00000320580 LRRC61Q9BV99 259 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 ZNF355PQ9NSJ1 428 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 B4GALT7Q9UBV7 327 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 NPIPB13A6NJU9 1138 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 NPIPB4C9JG80 1138 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 CORTO00230 105 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 PDLIM4P50479 330 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 RBX1P62877 108 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 FAM27BQ5VT28 67 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 LYSMD4Q5XG99 296 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 RHBDD2Q6NTF9 364 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 CLEC7AQ9BXN2 247 aa14.09□□□□□ -0.15
PACS1-201ENST00000320580 TM4SF20Q53R12 229 aa14.08□□□□□ -0.15
PACS1-201ENST00000320580 DEFB123Q8N688 67 aa14.08□□□□□ -0.15
PACS1-201ENST00000320580 OR10AG1Q8NH19 301 aa14.08□□□□□ -0.15
PACS1-201ENST00000320580 JKAMPQ9P055 326 aa14.08□□□□□ -0.15
PACS1-201ENST00000320580 R4GN57 208 aa14.08□□□□□ -0.15
PACS1-201ENST00000320580 SYNGR1O43759 233 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 LMO1P25800 156 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 A0A0G2JRQ6 117 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 CCL1P22362 96 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 Q6ZS52 159 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 COL25A1Q9BXS0 654 aaPredicted RBP14.08□□□□□ -0.16
PACS1-201ENST00000320580 OR2H1Q9GZK4 316 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 LRRC30A6NM36 301 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 P01737 135 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 TFF2Q03403 129 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 SLC23A3Q6PIS1 610 aa14.08□□□□□ -0.16
PACS1-201ENST00000320580 A0A087X0K7 114 aa14.07□□□□□ -0.16
PACS1-201ENST00000320580 RBFOX2O43251 390 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■■■□ 22.3
PACS1-201ENST00000320580 EFEMP2O95967 443 aa14.07□□□□□ -0.16
PACS1-201ENST00000320580 CGAP01215 116 aa14.07□□□□□ -0.16
PACS1-201ENST00000320580 COL9A1P20849 921 aa14.07□□□□□ -0.16
PACS1-201ENST00000320580 CCR5P51681 352 aa14.07□□□□□ -0.16
PACS1-201ENST00000320580 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
PACS1-201ENST00000320580 RPS19BP1Q86WX3 136 aaKnown RBP14.07□□□□□ -0.16
PACS1-201ENST00000320580 SAXO1Q8IYX7 474 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms