RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 IFNA17P01571 189 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 FBP1P09467 338 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 EGR1P18146 543 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 MEGF10Q96KG7 1140 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 PLCE1Q9P212 2302 aa11.74□□□□□ -0.53
VRK3-201ENST00000316763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.73□□□□□ -0.53
VRK3-201ENST00000316763 hCG_1809904A0A1W2PP81 198 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 A0A1W2PR64 198 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 A0A1W2PRV1 198 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 MAP1LC3B2A6NCE7 125 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 LINC00473A8K010 186 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 YPEL1O60688 119 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 OR4A8P0C604 315 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
VRK3-201ENST00000316763 RAB11AP62491 216 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 PMS2P11Q13670 270 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 ZNF726P1Q15940 193 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 RBMS3Q6XE24 437 aaKnown RBP11.73□□□□□ -0.53
VRK3-201ENST00000316763 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 YPEL2Q96QA6 119 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 OR2V2Q96R30 315 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 MAP1LC3BQ9GZQ8 125 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 VAX2Q9UIW0 290 aa11.73□□□□□ -0.53
VRK3-201ENST00000316763 CXorf65A6NEN9 183 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 SIAH2O43255 324 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 IGFBP2P18065 325 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
VRK3-201ENST00000316763 PNRC1Q12796 327 aaPredicted RBP11.72□□□□□ -0.53
VRK3-201ENST00000316763 LTC4SQ16873 150 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 MORN2Q502X0 79 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 MOGAT3Q86VF5 341 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 A1L4Q6 167 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 HPRT1P00492 218 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 CD3EP07766 207 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 FGF7P21781 194 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
VRK3-201ENST00000316763 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
VRK3-201ENST00000316763 RPP30P78346 268 aaKnown RBP11.72□□□□□ -0.53
VRK3-201ENST00000316763 C1QL4Q86Z23 238 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 GCSAMQ8N6F7 178 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 LHX4Q969G2 390 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
VRK3-201ENST00000316763 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
VRK3-201ENST00000316763 COL12A1Q99715 3063 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 IGHV3OR15-7A0A075B7D8 119 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 C5orf52A6NGY3 159 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 E7EQL1 145 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 F2RL2O00254 374 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
VRK3-201ENST00000316763 KIR2DS2P43631 304 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 GATA4P43694 442 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 ERVK-16P61578 105 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 GNB2P62879 340 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 NCR3LG1Q68D85 454 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
VRK3-201ENST00000316763 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.54
VRK3-201ENST00000316763 ICE1Q9Y2F5 2266 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 PMS2P5A8MQ11 134 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 VSTM5A8MXK1 200 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 C17orf112F2Z3M2 114 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.54
VRK3-201ENST00000316763 SPRY3O43610 288 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 FCGR3BO75015 233 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 CD55P08174 381 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 RAB7AP51149 207 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 EDDM3BP56851 147 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 ITLN1Q8WWA0 313 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 C12orf57Q99622 126 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 M0R1X1 148 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 UBE2CO00762 179 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 LHBP01229 141 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 PRAMEF5Q5TYX0 476 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
VRK3-201ENST00000316763 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
VRK3-201ENST00000316763 ITGB1BP1O14713 200 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 S100A8P05109 93 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms