RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 OR10J4P0C629 311 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 CEACAM1P13688 526 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 MYPOPQ86VE0 399 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 NPVFQ9HCQ7 196 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 DVL1O14640 695 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 PSG5Q15238 335 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 ZNF124Q15973 351 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 ABHD12Q8N2K0 398 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 DMRT1Q9Y5R6 373 aa11.28□□□□□ -0.6
PCDHB9-201ENST00000316105 IGHV1-18A0A0C4DH31 117 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 FAM157CP0CG43 387 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 HERPUD1Q15011 391 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 SRSF7Q16629 238 aaKnown RBP eCLIP11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 C20orf204Q6ZNR8 217 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 OR2T10Q8NGZ9 312 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 RAMP3O60896 148 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 IQCJQ1A5X6 159 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 TCF19Q9Y242 345 aa11.27□□□□□ -0.6
PCDHB9-201ENST00000316105 DDTP30046 118 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 CHRNB4P30926 498 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 PRRX1P54821 245 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 VAMP3Q15836 100 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 TNXAQ16473 311 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 LYL1P12980 280 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 ZNF146Q15072 292 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 IDI2-AS1Q9NZ38 188 aa11.27□□□□□ -0.61
PCDHB9-201ENST00000316105 SPINK4O60575 86 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 NMSQ5H8A3 153 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 ZNF525Q8N782 197 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 OR1L8Q8NGR8 309 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CTDSP1Q9GZU7 261 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 APELAP0DMC3 54 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 TDGF1P13385 188 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CD40P25942 277 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 GNG4P50150 75 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 A0A1W2PRD5 423 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 A0A1W2PRF3 423 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 A0A1W2PRM7 423 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 MPDU1O75352 247 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 CXorf1O96002 111 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 DIRC2Q96SL1 478 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 ZNF835Q9Y2P0 537 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
PCDHB9-201ENST00000316105 A0A1W2PN81 502 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 KDF1Q8NAX2 398 aaPredicted RBP11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 PDE6DO43924 150 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 ORM2P19652 201 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 CCL20P78556 96 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 CCL21O00585 134 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 DOCK11Q5JSL3 2073 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 LRP4O75096 1905 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 Q6P435 159 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
PCDHB9-201ENST00000316105 GTF3C1Q12789 2109 aa11.24□□□□□ -0.61
PCDHB9-201ENST00000316105 C20orf202A1L168 122 aa11.24□□□□□ -0.61
PCDHB9-201ENST00000316105 RBP4P02753 201 aa11.24□□□□□ -0.61
PCDHB9-201ENST00000316105 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
PCDHB9-201ENST00000316105 PCSK4Q6UW60 755 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms