RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM250H0YL14 139 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.53
SPAST-201ENST00000315285 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 GCGP01275 180 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 CCL1P22362 96 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 Q1RN00 199 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
SPAST-201ENST00000315285 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 SLC25A17O43808 307 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.54
SPAST-201ENST00000315285 UBTD1Q9HAC8 227 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 ZNF319Q9P2F9 582 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 SNRNP200O75643 2136 aaKnown RBP11.71□□□□□ -0.54
SPAST-201ENST00000315285 LNP1A1A4G5 178 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 ECSCRQ19T08 205 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 ZNF385CQ66K41 422 aaPredicted RBP11.71□□□□□ -0.54
SPAST-201ENST00000315285 BIVMQ86UB2 503 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 OR10S1Q8NGN2 331 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.54
SPAST-201ENST00000315285 MDC1Q14676 2089 aaKnown RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 C8orf88P0DMB2 117 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 LBHQ53QV2 105 aaPredicted RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 SPSB4Q96A44 273 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 MESP1Q9BRJ9 268 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 LOC102723996A0A087X1L8 192 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 PGPA6NDG6 321 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 ZNF729A6NN14 1252 aaPredicted RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 CD99P14209 185 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 ZNF25P17030 456 aaPredicted RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 PPOXP50336 477 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 ZNRF1Q8ND25 227 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 OR5R1Q8NH85 324 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 LYZL4Q96KX0 146 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
SPAST-201ENST00000315285 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
SPAST-201ENST00000315285 VWA8A3KMH1 1905 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 IFNL4K9M1U5 179 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 CRYBB3P26998 211 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 ACP7Q6ZNF0 438 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 H0YIZ8 118 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 MPZP25189 248 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 GPR6P46095 362 aaPredicted RBP11.69□□□□□ -0.54
SPAST-201ENST00000315285 NUBP1P53384 320 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 J3KRW8 73 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 NDUFA2O43678 99 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
SPAST-201ENST00000315285 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 NCOR1O75376 2440 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 PQLC2LA1A4F0 135 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 EGR1P18146 543 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 ABLIM2Q6H8Q1 611 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 NABP2Q9BQ15 211 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
SPAST-201ENST00000315285 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 FXYD3Q14802 87 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 ZNF146Q15072 292 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 RPL39P5Q59GN2 51 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 NPCDR1Q9BY65 106 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 CECR9P0C854 216 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 CFHR1Q03591 330 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.68□□□□□ -0.54
SPAST-201ENST00000315285 ZNF883P0CG24 379 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 RBM14Q96PK6 669 aaKnown RBP11.68□□□□□ -0.54
SPAST-201ENST00000315285 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
SPAST-201ENST00000315285 A0A0A6YYD4 124 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 MRPS18CQ9Y3D5 142 aaKnown RBP11.67□□□□□ -0.54
SPAST-201ENST00000315285 LOC105371267A0A1B0GV96 52 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 GCHFRP30047 84 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 HOXA4Q00056 320 aaPredicted RBP11.67□□□□□ -0.54
SPAST-201ENST00000315285 WBP1Q96G27 269 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 WDR81Q562E7 1941 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 C17orf98A8MV24 154 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 BPIFA4PQ86YQ2 179 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 OR4A5Q8NH83 315 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 LPAR2Q9HBW0 351 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 TP53BP1Q12888 1972 aaPredicted RBP11.67□□□□□ -0.54
SPAST-201ENST00000315285 GBF1Q92538 1859 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms